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OR_08142018_10m_0_1um_scaffold_1167

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_1167_1
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1062
DNA (1062bp) protein (354aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10.;"
RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of
OR_08142018_10m_0_1um_scaffold_1167_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1090..1752
DNA (663bp) protein (221aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RPIA_THICR
OR_08142018_10m_0_1um_scaffold_1167_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1757..2242
DNA (486bp) protein (162aa)
Redoxin domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBV4_9GAMM
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AHF01678.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_1167_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2285..3568
DNA (1284bp) protein (428aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DB98_THICA
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_1167_5
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3580..4437
DNA (858bp) protein (286aa)
methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5)
Bifunctional protein FolD 1 {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Bifunctional protein FolD 1 n=2 Tax=Thiomicrospira crunogena RepID=FOLD1_THICR
OR_08142018_10m_0_1um_scaffold_1167_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4434..5330)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036C556D
Ferrous iron transporter {ECO:0000313|EMBL:KDN95816.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
cation diffusion facilitator family transporter
OR_08142018_10m_0_1um_scaffold_1167_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5400..6560
DNA (1161bp) protein (387aa)
Uncharacterized conserved protein UCP015557 id=1892918 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=CG_Hydro_01
Displaying 7 items

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