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OR_08142018_10m_0_1um_scaffold_1168

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_1168_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..247)
DNA (246bp) protein (82aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAM1_THICA
OR_08142018_10m_0_1um_scaffold_1168_2
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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481..1578
DNA (1098bp) protein (366aa)
DNA processing protein DprA n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EWL6_DICNV
dprA; DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:ABQ13496.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacter nodosus (strain VCS1703A).;"
OR_08142018_10m_0_1um_scaffold_1168_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1746..4307
DNA (2562bp) protein (854aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAL7_THICA
OR_08142018_10m_0_1um_scaffold_1168_4
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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4424..5473
DNA (1050bp) protein (350aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000255|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000255|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00150}; Short=NAGSA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00150};; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=ARGC_LARHH
OR_08142018_10m_0_1um_scaffold_1168_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5529..5870
DNA (342bp) protein (114aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8S1_9GAMM
iron--sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_1168_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5887..6558
DNA (672bp) protein (224aa)
citrate synthase (EC:2.3.3.5)
Citrate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IS7_THICR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Displaying 6 items

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