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OR_08142018_10m_0_1um_scaffold_350

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_350_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..193)
DNA (192bp) protein (64aa)
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQD9_ACCPU
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV37546.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
OR_08142018_10m_0_1um_scaffold_350_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205..972)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000380DD39
sugar ABC transporter substrate-binding protein
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_350_3
unknown

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comp(935..1465)
DNA (531bp) protein (177aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_350_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1482..2054)
DNA (573bp) protein (191aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BVK1_9GAMM
Tax=BJP_IG2102_Gammaproteobacteria_62_140
OR_08142018_10m_0_1um_scaffold_350_5
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2220..2768
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4INW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ11807.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_350_6
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2765..3568
DNA (804bp) protein (268aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Methylomicrobium album BG8 RepID=H8GLA3_METAL
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJV07024.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
OR_08142018_10m_0_1um_scaffold_350_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3565..4341
DNA (777bp) protein (259aa)
ABC transporter permease n=1 Tax=Thiomicrospira arctica RepID=UPI000380EBD4
hypothetical protein
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_350_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4348..4827
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036E3EDF
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:AEG31244.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_350_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4857..5468
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037A4B13
Toluene tolerance protein {ECO:0000313|EMBL:KDN95332.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Toluene tolerance protein
OR_08142018_10m_0_1um_scaffold_350_10
unknown

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5458..5751
DNA (294bp) protein (98aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_350_11
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5744..6673
DNA (930bp) protein (310aa)
Abc-type transporter, atpase component, lose family n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5E8_9GAMM
Abc-type transporter, atpase component, lose family {ECO:0000313|EMBL:EIT69140.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
ABC transporter
OR_08142018_10m_0_1um_scaffold_350_12
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6670..7437
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBE0_THICA
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_350_13
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7503..7736
DNA (234bp) protein (78aa)
BolA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UBE9_9GAMM
BolA family protein {ECO:0000313|EMBL:EGV18267.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
BolA family protein
OR_08142018_10m_0_1um_scaffold_350_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7736..8995
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiomicrospira halophila RepID=UPI000379B61A
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_350_15
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9012..9647
DNA (636bp) protein (212aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
ATP phosphoribosyltransferase n=1 Tax=Pseudomonas putida S610 RepID=V6JIP1_PSEPU
hisG; ATP phosphoribosyltransferase catalytic subunit
OR_08142018_10m_0_1um_scaffold_350_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9651..10946
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
histidinol dehydrogenase n=1 Tax=Thiomicrospira arctica RepID=UPI0003714465
histidinol dehydrogenase
OR_08142018_10m_0_1um_scaffold_350_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10951..12033
DNA (1083bp) protein (361aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase 2 {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase 2 {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Histidinol-phosphate aminotransferase 2 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=HIS82_DECAR
OR_08142018_10m_0_1um_scaffold_350_18
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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12030..12776
DNA (747bp) protein (249aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Burkholderia cepacia GG4 RepID=J7J5I9_BURCE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
OR_08142018_10m_0_1um_scaffold_350_19
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12889..13476
DNA (588bp) protein (196aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY7_THICR
OR_08142018_10m_0_1um_scaffold_350_20
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13476..14720
DNA (1245bp) protein (415aa)
Cytochrome b n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY6_THICR
cytochrome b/b6-like protein
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_350_21
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14663..15388
DNA (726bp) protein (242aa)
Ubiquinol:cytochrome c oxidoreductase (Bc1 complex) cytochrome c1 subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GY5_THICR
cytochrome c1
Ubiquinol:cytochrome c oxidoreductase (Bc1 complex) cytochrome c1 subunit {ECO:0000313|EMBL:ABB41588.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_350_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..16090
DNA (606bp) protein (202aa)
Glutathione S-transferase domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCG7_9GAMM
sspA; stringent starvation protein A
Stringent starvation protein A {ECO:0000313|EMBL:AHF01886.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_350_23
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16092..16514
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002EBB9DF
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:EWH10275.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum agarivorans DS-2.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_350_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16524..17738
DNA (1215bp) protein (405aa)
DNA repair protein RadA n=1 Tax=Thiomicrospira halophila RepID=UPI00036FCDAD
DNA repair protein RadA
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_350_25
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18349
DNA (555bp) protein (185aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9R7_9GAMM
(dimethylallyl)adenosine tRNA methylthiotransferase
Displaying 25 items

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