ggKbase home page

OR_08142018_10m_0_1um_scaffold_491

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_491_1
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
lipoate--protein ligase (EC:2.3.1.181)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (Enterobacter gergoviae).;"
PREDICTED: octanoyltransferase-like n=1 Tax=Ceratitis capitata RepID=UPI000329F6AB
OR_08142018_10m_0_1um_scaffold_491_2
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222..518)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035F3160
UPF0250 protein JT25_21320 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_491_3
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(533..1396)
DNA (864bp) protein (288aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=2 Tax=Halomonas anticariensis RepID=S2LFM0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC03511.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
OR_08142018_10m_0_1um_scaffold_491_4
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1622..2746)
DNA (1125bp) protein (375aa)
Rod shape-determining protein RodA n=1 Tax=Vibrio cholerae HE-09 RepID=F9AE87_VIBCL
Rod shape-determining protein RodA {ECO:0000313|EMBL:KFD79669.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
Rod shape-determining protein RodA
OR_08142018_10m_0_1um_scaffold_491_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2743..3723)
DNA (981bp) protein (327aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:ACX96107.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACX96107.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Penicillin-binding protein 2 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L084_HALNC
OR_08142018_10m_0_1um_scaffold_491_6
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3701..4387)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ER64_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30265.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
peptidoglycan glycosyltransferase
OR_08142018_10m_0_1um_scaffold_491_7
Arsenophonus nasoniae, Arsenophonus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4406..4915)
DNA (510bp) protein (170aa)
Rod shape-determining protein n=1 Tax=Arsenophonus nasoniae RepID=D2U2L4_9ENTR
Rod shape-determining protein {ECO:0000313|EMBL:CBA75313.1}; TaxID=638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Arsenophonus.;" source="Arsenophonus nasoniae (son-killer infecting Nasonia vitripennis).;"
mreD; rod shape-determining protein
OR_08142018_10m_0_1um_scaffold_491_8
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4912..5775)
DNA (864bp) protein (288aa)
Cell shape-determining protein MreC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F50_THICR
Rod shape-determining protein MreC {ECO:0000313|EMBL:KEA63275.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
rod shape-determining protein MreC
OR_08142018_10m_0_1um_scaffold_491_9
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5791..6831)
DNA (1041bp) protein (347aa)
Rod shape-determining protein MreB n=1 Tax=Methylophaga lonarensis MPL RepID=M7PHL6_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:EMR13375.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
rod shape-determining protein Mbl
OR_08142018_10m_0_1um_scaffold_491_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7052..8971
DNA (1920bp) protein (640aa)
ABC transporter-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9W5_9PROT
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:BAN34820.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
OR_08142018_10m_0_1um_scaffold_491_11
Synechococcus sp. KORDI-52, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9046..10182
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B7873D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50015.1}; TaxID=585425 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. KORDI-52.;"
OR_08142018_10m_0_1um_scaffold_491_12
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10290..10775
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E28_THICR
Uncharacterized protein {ECO:0000313|EMBL:KDN96241.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_491_13
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10800..12308
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0M3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHQ51360.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_491_14

Not on your lists

12337..13326
DNA (990bp) protein (330aa)
Transcriptional regulator, LysR family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IK2_THICR
LysR family transcriptional regulator
CbbR-m {ECO:0000313|EMBL:AIM47443.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
OR_08142018_10m_0_1um_scaffold_491_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13329..13760)
DNA (432bp) protein (144aa)
Fe/S cluster cysteine desulfuration protein n=1 Tax=Thiomicrospira halophila RepID=UPI000365F7ED
Fe-S metabolism associated SufE
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_491_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13851..14867
DNA (1017bp) protein (339aa)
Beta-lactamase-like protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBT8_9GAMM
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHF01662.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_491_17
unknown

Not on your lists

comp(15017..15415)
DNA (399bp) protein (133aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_491_18
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15608..16174
DNA (567bp) protein (189aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBT3_9GAMM
OR_08142018_10m_0_1um_scaffold_491_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16171..16869
DNA (699bp) protein (233aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBT3_9GAMM
OR_08142018_10m_0_1um_scaffold_491_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16879..18378
DNA (1500bp) protein (500aa)
GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Thiomicrospira halophila RepID=UPI00035CE68A
Tax=BJP_IG2102_Gammaproteobacteria_62_140
OR_08142018_10m_0_1um_scaffold_491_21
unknown

Not on your lists

18555..18704
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 21 items

View Taxonomy