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OR_08142018_10m_0_1um_scaffold_506

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_506_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..810
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036050DD
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
membrane protein
OR_08142018_10m_0_1um_scaffold_506_2
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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910..1506
DNA (597bp) protein (199aa)
Rhodanese domain protein n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QKZ9_CHLP8
Rhodanese domain-containing protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
OR_08142018_10m_0_1um_scaffold_506_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1707..2069
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IN1_THICR
NAD-binding homoserine dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:ABB40992.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_506_trna_1
unknown

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comp(2040..2127)
DNA (88bp)
transferRNA Ser
OR_08142018_10m_0_1um_scaffold_506_4
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2178..3164)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI00036DCEFB
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
OR_08142018_10m_0_1um_scaffold_506_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3339..4391
DNA (1053bp) protein (351aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB78_9GAMM
histidine kinase
OR_08142018_10m_0_1um_scaffold_506_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4384..5799
DNA (1416bp) protein (472aa)
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB77_9GAMM
glnG; nitrogen regulation protein NR(I)
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:AHF01350.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_506_7
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5860..6642
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHR0_GALCS
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
OR_08142018_10m_0_1um_scaffold_506_8
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6681..7220
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UB3_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
OR_08142018_10m_0_1um_scaffold_506_9
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7217..9130
DNA (1914bp) protein (638aa)
Fused putative transporter subunits of ABC superfamily: ATP-binding components n=1 Tax=Halomonas sp. A3H3 RepID=T2L6M8_9GAMM
Fused putative transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CDG52802.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
ABC transporter-like protein
OR_08142018_10m_0_1um_scaffold_506_10
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9188..9403
DNA (216bp) protein (72aa)
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB3_THICR
diguanylate cyclase
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor {ECO:0000313|EMBL:ABB42510.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_506_11
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9428..10990
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000366CD9A
diguanylate cyclase
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor {ECO:0000313|EMBL:ABB42510.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_506_12
unknown

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11093..11245
DNA (153bp) protein (51aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_506_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11313..12695
DNA (1383bp) protein (461aa)
coproporphyrinogen III oxidase n=1 Tax=Thiomicrospira arctica RepID=UPI000367E061
coproporphyrinogen III oxidase
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_506_14
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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12786..14447
DNA (1662bp) protein (554aa)
sensor/response regulator hybrid (EC:2.7.3.-)
PAS domain S-box/PAS domain S-box n=1 Tax=Rheinheimera sp. A13L RepID=F7NTC9_9GAMM
PAS domain S-box/PAS domain S-box {ECO:0000313|EMBL:EGM78928.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
Displaying 15 items

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