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OR_08142018_10m_0_1um_scaffold_634

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_634_1
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1436)
DNA (1434bp) protein (478aa)
IMP cyclohydrolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B61630
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
OR_08142018_10m_0_1um_scaffold_634_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1504..1749)
DNA (246bp) protein (82aa)
Transcriptional regulator, Fis family n=3 Tax=root RepID=B5ELA9_ACIF5
Fis family transcriptional regulator
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_634_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1855..2208
DNA (354bp) protein (118aa)
ferredoxin n=1 Tax=Marinobacterium stanieri RepID=UPI00025598BD
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABB41141.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_634_4
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2275..2544)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003616CE8
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1216980 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. masoucida NBRC 13784.;"
OR_08142018_10m_0_1um_scaffold_634_5
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2747..3517
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA3_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB40770.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_634_6
unknown

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3521..4081
DNA (561bp) protein (187aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_634_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4068..4826
DNA (759bp) protein (253aa)
PP-loop family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J95_THICR
PP-loop protein
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_634_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4810..5706
DNA (897bp) protein (299aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DB13_THICA
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEG32346.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_634_9
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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5693..7834
DNA (2142bp) protein (714aa)
MscS Mechanosensitive ion channel n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4B4_METMM
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEG00330.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
OR_08142018_10m_0_1um_scaffold_634_10
Bacillus boroniphilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7831..8457
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6T5A5_9BACI
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAE44363.1}; TaxID=1294265 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus boroniphilus JCM 21738.;"
slr1183; hypothetical protein
OR_08142018_10m_0_1um_scaffold_634_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8471..8791
DNA (321bp) protein (107aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Phosphoheptose isomerase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6G1_HALH1
phosphoheptose isomerase
OR_08142018_10m_0_1um_scaffold_634_12
Vibrio brasiliensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8872..9783
DNA (912bp) protein (304aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Vibrio brasiliensis LMG 20546 RepID=E8LTJ5_9VIBR
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EGA66088.1}; TaxID=945543 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio brasiliensis LMG 20546.;"
putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
OR_08142018_10m_0_1um_scaffold_634_13
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9798..11429
DNA (1632bp) protein (544aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
ATP-binding region, ATPase-like protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21L07_SACD2
ATP-binding region, ATPase-like protein
OR_08142018_10m_0_1um_scaffold_634_14
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11426..12610
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6ZCU2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EWG99225.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_634_15
unknown

Not on your lists

12613..13119
DNA (507bp) protein (169aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_634_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13103..14071)
DNA (969bp) protein (323aa)
Polyprenyl synthetase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8T3_9GAMM
octaprenyl diphosphate synthase
Octaprenyl diphosphate synthase {ECO:0000313|EMBL:AHF00521.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_634_17
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14282..14905)
DNA (624bp) protein (208aa)
Phosphomethylpyrimidine kinase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH20794.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
conserved hypothetical protein
OR_08142018_10m_0_1um_scaffold_634_18
unknown

Not on your lists

comp(14912..15724)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000382B12F
OR_08142018_10m_0_1um_scaffold_634_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15773..18049
DNA (2277bp) protein (759aa)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D882_9GAMM
50S rRNA methyltransferase
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_634_trna_1
unknown

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18070..18141
DNA (72bp)
transferRNA Gln
OR_08142018_10m_0_1um_scaffold_634_20
Candidatus Methylopumilus planktonicus, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18201..18320
DNA (120bp) protein (40aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1581557 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-2-53.;"
ribose-phosphate pyrophosphokinase
Displaying 21 items

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