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OR_08142018_10m_0_1um_scaffold_712

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_712_1
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..875)
DNA (873bp) protein (291aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
DNA primase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EM4_THICR
DNA primase
OR_08142018_10m_0_1um_scaffold_712_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(902..1351)
DNA (450bp) protein (150aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DDBF8
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:AKH21513.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_712_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1408..1623)
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=1 Tax=Thiomicrospira halophila RepID=UPI000367BF84
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_712_4
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1831..2880
DNA (1050bp) protein (350aa)
glycoprotease metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TSAD_THICR
OR_08142018_10m_0_1um_scaffold_712_5
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2896..3786)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCV8_9GAMM
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEG31158.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_712_6
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3803..4609)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037276B6
Membrane protein {ECO:0000313|EMBL:KDN96096.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_712_7
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4764..5738
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQF5_NEPCE
Uncharacterized protein {ECO:0000313|EMBL:EAR62576.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_712_8
Acinetobacter sp. NBRC 100985, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5765..6799
DNA (1035bp) protein (345aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
Putative cobalamin-independent methionine synthase n=1 Tax=Acinetobacter sp. NBRC 100985 RepID=G7GH41_9GAMM
Putative cobalamin-independent methionine synthase {ECO:0000313|EMBL:GAB02916.1}; TaxID=1071390 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NBRC 100985.;"
OR_08142018_10m_0_1um_scaffold_712_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6805..7479
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003779738
Uncharacterized protein {ECO:0000313|EMBL:KDN96199.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
oxidoreductase FAD/NAD(P)-binding protein
OR_08142018_10m_0_1um_scaffold_712_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7674..8054)
DNA (381bp) protein (127aa)
gloA; lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ88_9PROT
Lactoylglutathione lyase {ECO:0000313|EMBL:GAO36673.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
OR_08142018_10m_0_1um_scaffold_712_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8196..9038
DNA (843bp) protein (281aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036437C1
OR_08142018_10m_0_1um_scaffold_712_12
Idiomarina sp. A28L, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9126..10184)
DNA (1059bp) protein (353aa)
Penicillin V acylase-like amidase n=1 Tax=Idiomarina sp. A28L RepID=F7RVX3_9GAMM
Penicillin V acylase-like amidase {ECO:0000313|EMBL:EGN75906.1}; Flags: Precursor;; TaxID=1036674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. A28L.;"
choloylglycine hydrolase
OR_08142018_10m_0_1um_scaffold_712_13
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..11177)
DNA (969bp) protein (323aa)
sodium:calcium antiporter n=1 Tax=Desulfovibrio longus RepID=UPI0003B76D6C
CACA family Na+/Ca+ antiporter
Na+/Ca+ antiporter, CaCA family {ECO:0000313|EMBL:ADU62675.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
OR_08142018_10m_0_1um_scaffold_712_14
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11260..11850)
DNA (591bp) protein (197aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=GATB_THISH
glutamyl-tRNA(Gln) amidotransferase subunit B
Displaying 14 items

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