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OR_08142018_10m_0_1um_scaffold_832

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_832_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..582
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC77_9GAMM
16S rRNA methyltransferase
OR_08142018_10m_0_1um_scaffold_832_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(579..1463)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLI7_9BURK
Transcriptional regulator MirA {ECO:0000313|EMBL:EXI76198.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
regulatory protein MerR
OR_08142018_10m_0_1um_scaffold_832_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1527..3641)
DNA (2115bp) protein (705aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D994_9GAMM
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AHF00367.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_832_4
RIFOXYD12_FULL_Sulfuricurvum_44_77_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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3715..4455
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SCE2_9HELI
hypothetical protein
Tax=RIFOXYD12_FULL_Sulfuricurvum_44_77_curated
OR_08142018_10m_0_1um_scaffold_832_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4503..4916
DNA (414bp) protein (138aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UD34_9GAMM
hisI; phosphoribosyl-AMP cyclohydrolase
OR_08142018_10m_0_1um_scaffold_832_6
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

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4906..5238
DNA (333bp) protein (111aa)
Phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
phosphoribosyl-ATP pyrophosphatase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00037FE22D
Tax=CG_Mariprof_01
OR_08142018_10m_0_1um_scaffold_832_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5276..5590
DNA (315bp) protein (105aa)
Histidine triad (HIT) protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAJ8_9GAMM
HIT family hydrolase
HIT family hydrolase {ECO:0000313|EMBL:AHF02014.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_832_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5608..5913
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000365EA0D
twin arginine-targeting protein translocase
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_832_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5953..6531
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036139A5
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
twin-arginine translocation protein TatB
OR_08142018_10m_0_1um_scaffold_832_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6528..7661
DNA (1134bp) protein (378aa)
Sec-independent protein translocase protein TatC n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAJ5_9GAMM
preprotein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_832_11
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7733..8314
DNA (582bp) protein (194aa)
RNA polymerase sigma 70 n=1 Tax=Kangiella aquimarina RepID=UPI00036768DC
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
RNA polymerase sigma-32 subunit RpoH
OR_08142018_10m_0_1um_scaffold_832_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8334..9245)
DNA (912bp) protein (304aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000378F537
biotin biosynthesis protein BioC
Displaying 12 items

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