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OR_08142018_10m_0_1um_scaffold_838

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_838_1
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..554
DNA (552bp) protein (184aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAE6_THICA
OR_08142018_10m_0_1um_scaffold_838_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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551..1120
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAE5_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31111.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_838_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1172..2341
DNA (1170bp) protein (390aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9J9_9GAMM
OR_08142018_10m_0_1um_scaffold_838_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2338..2943
DNA (606bp) protein (202aa)
Methionine biosynthesis protein MetW n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9J8_9GAMM
methionine biosynthesis protein MetW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
OR_08142018_10m_0_1um_scaffold_838_5

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2943..3638
DNA (696bp) protein (232aa)
TraT complement resistance protein n=1 Tax=mine drainage metagenome RepID=E6QD09_9ZZZZ
TraT complement resistance protein {ECO:0000313|EMBL:CBI05085.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IncF plasmid conjugative transfer surface exclusion protein TraT
OR_08142018_10m_0_1um_scaffold_838_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3642..4007)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035F290D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73674.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
OR_08142018_10m_0_1um_scaffold_838_7
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4026..5324)
DNA (1299bp) protein (433aa)
SAM-dependent methyltransferase n=1 Tax=Burkholderia kururiensis RepID=UPI00034BBA29
ubiE/COQ5 methyltransferase family protein
Tax=RBG_16_Gamma2_64_10_curated
OR_08142018_10m_0_1um_scaffold_838_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5431..6765)
DNA (1335bp) protein (445aa)
dihydroorotase (EC:3.5.2.3)
Allantoinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9G8_9GAMM
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_838_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6829..7122
DNA (294bp) protein (98aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JIS2_9PSED
hypothetical protein
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_838_10
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7095..8042)
DNA (948bp) protein (316aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
GTP cyclohydrolase FolE2 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAE8_THICA
OR_08142018_10m_0_1um_scaffold_838_11
Serratia odorifera, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8084..8374)
DNA (291bp) protein (97aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=667129 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia odorifera DSM 4582.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Serratia odorifera DSM 4582 RepID=D4DZB8_SEROD
dut; deoxyuridinetriphosphatase
OR_08142018_10m_0_1um_scaffold_838_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8390..9634)
DNA (1245bp) protein (415aa)
phosphopantothenoylcysteine decarboxylase n=1 Tax=Dyella japonica RepID=UPI0003024012
phosphopantothenoylcysteine decarboxylase
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:AHX15391.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
OR_08142018_10m_0_1um_scaffold_838_13
unknown

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9752..9988
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 13 items

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