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OR_08142018_10m_0_1um_scaffold_850

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_850_1
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..825
DNA (825bp) protein (275aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000379BF0D
OR_08142018_10m_0_1um_scaffold_850_2
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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822..1610
DNA (789bp) protein (263aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DNN6_9GAMM
dimethyladenosine transferase
OR_08142018_10m_0_1um_scaffold_850_3
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1603..1992
DNA (390bp) protein (130aa)
Protein ApaG n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=APAG_SHEWM
apaG; ApaG protein
Protein ApaG {ECO:0000255|HAMAP-Rule:MF_00791}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
OR_08142018_10m_0_1um_scaffold_850_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1994..2863
DNA (870bp) protein (290aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine tetraphosphatase {ECO:0000256|HAMAP-Rule:MF_00199}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=8 Tax=Pseudomonas aeruginosa RepID=N2CQR8_PSEAI
diadenosine tetraphosphatase
OR_08142018_10m_0_1um_scaffold_850_5
unknown

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2867..3406
DNA (540bp) protein (180aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_850_6
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3470..5515)
DNA (2046bp) protein (682aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003800F10
Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) {ECO:0000313|EMBL:KDE39111.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_850_7
unknown

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comp(5505..5615)
DNA (111bp) protein (37aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_850_8
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5554..6054)
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Dihydrofolate reductase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EFC8_THECK
dihydrofolate reductase
OR_08142018_10m_0_1um_scaffold_850_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6051..6884)
DNA (834bp) protein (278aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Thymidylate synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCN8_9GAMM
thymidylate synthase
OR_08142018_10m_0_1um_scaffold_850_10
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..7533)
DNA (666bp) protein (222aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YJH3_METFJ
prolipoprotein diacylglyceryl transferase
OR_08142018_10m_0_1um_scaffold_850_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7547..8287)
DNA (741bp) protein (247aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000255|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000255|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000255|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00719}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Cobalamin synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=COBS_THIDA
OR_08142018_10m_0_1um_scaffold_850_12
unknown

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comp(8290..8520)
DNA (231bp) protein (77aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_850_13
unknown

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9032..9271
DNA (240bp) protein (80aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_850_14
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9281..10828
DNA (1548bp) protein (516aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Spiribacter salinus M19-40 RepID=R4V5Y6_9GAMM
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGM40470.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
OR_08142018_10m_0_1um_scaffold_850_15
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10869..11438)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN46_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI78926.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_850_16
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..13706)
DNA (2253bp) protein (751aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI00037B4673
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=CG_Beta_01
OR_08142018_10m_0_1um_scaffold_850_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13718..16273)
DNA (2556bp) protein (852aa)
Chemotaxis protein methyltransferase CheR n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GWQ9_9PROT
hypothetical protein
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_850_18
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16407..18725)
DNA (2319bp) protein (773aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9R0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KDN96271.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
methyl-accepting chemotaxis protein
Displaying 18 items

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