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OR_08142018_10m_0_1um_scaffold_866

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_866_1
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..468)
DNA (468bp) protein (156aa)
phnN; PhnN (EC:2.7.4.23)
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=PHNN_LARHH
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
OR_08142018_10m_0_1um_scaffold_866_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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626..2725
DNA (2100bp) protein (700aa)
polyphosphate kinase (EC:2.7.4.1)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000365B423
Tax=CG_Thiomicrospira_01
OR_08142018_10m_0_1um_scaffold_866_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2773..3681
DNA (909bp) protein (303aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036243D2
Phosphatase {ECO:0000313|EMBL:KDN96388.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
OR_08142018_10m_0_1um_scaffold_866_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3690..4091
DNA (402bp) protein (134aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
Ppx/GppA phosphatase {ECO:0000313|EMBL:AEG31055.1}; EC=3.6.1.40 {ECO:0000313|EMBL:AEG31055.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Ppx/GppA phosphatase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA89_THICA
OR_08142018_10m_0_1um_scaffold_866_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4155..5060)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036ECC6A
metal dependent phosphohydrolase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
OR_08142018_10m_0_1um_scaffold_866_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5067..5960)
DNA (894bp) protein (298aa)
Metal dependent phosphohydrolase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYH2_9BACT
metal-dependent phosphohydrolase, HDOD domain-containing
Metal-dependent phosphohydrolase, HDOD domain-containing {ECO:0000313|EMBL:ABB31186.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
OR_08142018_10m_0_1um_scaffold_866_7
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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6036..6830
DNA (795bp) protein (265aa)
peptidase n=1 Tax=Nevskia ramosa RepID=UPI0003B3675B
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:EDL66925.1}; TaxID=410291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain HY01).;"
peptidase
OR_08142018_10m_0_1um_scaffold_866_8
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6869..7678
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QEJ0_GLUHA
hypothetical protein
OR_08142018_10m_0_1um_scaffold_866_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7724..8584)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003791ACD
flagellin
Flagellin {ECO:0000313|EMBL:AHF01583.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_08142018_10m_0_1um_scaffold_866_10
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8768..9688
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035D76D8
bile acid:sodium symporter
Bile acid:Na+ symporter (BASS) family transporter {ECO:0000313|EMBL:ABB41814.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_866_11
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9693..10169)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI000370BFD1
UPF0061 protein Rhein_3927 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
hypothetical protein
OR_08142018_10m_0_1um_scaffold_866_12
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10114..10968)
DNA (855bp) protein (285aa)
UPF0061 protein VI06_12325 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein id=12497354 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
OR_08142018_10m_0_1um_scaffold_866_13
RLO_Sulfurimonas_36_12, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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11101..12198
DNA (1098bp) protein (366aa)
Prokaryotic ATPase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NKP3_9DELT
ATPase
Tax=RifCSPlowO2_12_Sulfurimonas_36_12_curated
OR_08142018_10m_0_1um_scaffold_866_14
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12342..13520)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035E6D7F
Flavohemoglobin {ECO:0000313|EMBL:KDN96794.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
flavohemoglobin
OR_08142018_10m_0_1um_scaffold_866_15
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..14089
DNA (444bp) protein (148aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI9_THICR
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABB41384.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
OR_08142018_10m_0_1um_scaffold_866_16
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14145..14870
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037A7ABF
CBS domain-containing protein {ECO:0000313|EMBL:AKH22345.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
HPP family protein
OR_08142018_10m_0_1um_scaffold_866_17
unknown

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14942..15100
DNA (159bp) protein (53aa)

This feature has no annotations

OR_08142018_10m_0_1um_scaffold_866_18
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15527..15748)
DNA (222bp) protein (74aa)
Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NR99_9DELT
Helix-turn-helix motif {ECO:0000313|EMBL:EAT04217.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
OR_08142018_10m_0_1um_scaffold_866_19
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15819..16235)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
recombinase n=1 Tax=Ralstonia solanacearum RepID=UPI00031F2D8B
predicted nucleic acid-binding protein, contains PIN domain
OR_08142018_10m_0_1um_scaffold_866_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16232..16477)
DNA (246bp) protein (82aa)
Prevent-host-death family protein n=1 Tax=Thauera sp. 28 RepID=N6YMF9_9RHOO
hypothetical protein
Tax=CG_Rhodof_02
OR_08142018_10m_0_1um_scaffold_866_21
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16611..17426
DNA (816bp) protein (272aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
7-cyano-7-deazaguanine reductase n=1 Tax=Vibrio gazogenes RepID=UPI000393F8C3
queF; 7-cyano-7-deazaguanine reductase
OR_08142018_10m_0_1um_scaffold_866_22
Shewanella sp. cp20, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17638..17976
DNA (339bp) protein (113aa)
UPF0301 protein Shew_1144 n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=Y1144_SHELP
UPF0301 protein DB48_11805 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1521167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. cp20.;"
hypothetical protein
Displaying 22 items

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