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OR_08142018_10m_0_1um_scaffold_731_8

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(8543..12322)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 1303.0
  • Bit_score: 1694
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 1307.0
  • Bit_score: 1603
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiomicrospira arctica RepID=UPI00035D5B0B similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 1309.0
  • Bit_score: 1660
  • Evalue 0.0

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Taxonomy

Hydrogenovibrio marinus → Hydrogenovibrio → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3780
ATGCGCTCTATTTTTCCGATTAAAGCGGTTTCGGGTGCAGCAGAATTAGACTATGTGTCTTATCGCGTTGGTGTACCCGAATTTGATGTTAAAGAGTGTAAGCAACGTGGAGCGACTTATTCAGCTCCCTTGCGCGCCAAACTACGCTTGGTGATTTTGGATAAAGATTCACCTGAAAATAACCGTCAAATTAAAGCCGTTAAAGAGCAAGAAGTTTACTTAGGCGATGTGCCACTCATGACCGAAAATGGTACCTTTATTATTAATGGTACTGAACGGGTTATTGTGAGCCAGTTACATCGTTCACCAGGCGTTATTTTTGATAGTGATAAGGGTAAGACTCACTCATCTGGTAAGGTCCTTTTCAATGCGCGCATTATTCCTTACCGTGGTTCTTGGTTAGATTTTGAATTTGACCATCACGATATTTTGTTTGTGCGTATTGACCGTCGTCGTAAACTGCCAGTGACTGTGCTGTTGCGTGCGATGGGTTATGACAATGCCAGTATTTTGTCGCAATTCTTTGAAGAAACAAAGGTTTCATACGATGGCAATAAGTTTGAATTAGCCATTGTTGATTCGCAGTTGAAAGGCGAAACAGCTACCTTTGATATTATGAATGGCGACAAGCTTATGGTTGAGGCAGGTAAGAAAATTACTGCTAAAACCATTCGAGATTTTAAAGCCGCTGGTATGGAAACCCTCGTAGTTCCAGAAGAGTTTTTGCTCGGCAAAGCGCTGATGAAAGACCTAGTTGATGCTGATACGGGCGAAGTCATTGCACTGGCTAACGATGTTATTAACCAAGAACGATTAGAAAAAATCAAGTTAATGTCATCGGTTAACCTTTCATTGGTTTACACCAATGAATTAGATCAAGGTGCGTTTATTTCTGAAACCATGCGTTTGGATAACACCAAAACTGCGCTAGATGCTTGGGTGGAAATTTACCGCATGATGCGTCCAGGTGAACCACCGACAGCAGAGTCATCAGAAAAACTATTTAACAGCTTATTCTTCTCACAAGAACGTTACGACTTGTCAGATGTGGGTCGTATGAAGCTGAATCGTCGCTTGCATCGTGATCACAACGAAGGTGCTTTAGTGCTTTCAAATGATGACATCATTGATGTGATCAAAGAGCTCATTACCATTCGTAACGGTAAGAGTGTTGTTGACGATATCGACACCCTTGCTAACCGTCGTGTACGTGCTGTTGGTGAAATGGCTGAAAACGCCTTCCGCGTTGGTTTGGTTCGTGTCGAGCGTGCGGTACGTGAGCGTTTGAATTTGGCTGAATCTGAAGGCTTAATGCCTCAAGATTTAATCAATGCCAAACCGATTTCAGCGGCGATTAAAGAGTTCTTTGGTTCAAGTCAATTGTCTCAGTGTCCGATTGAAACGCCTGAGGGTCCAAACATTGGTTTGATTAACTCTTTGGCAGTTTATGCACGTACCAATGAATATGGCTTTATTGAAACACCTTACCGCCGTGTCGTTAATGGTCAAGTAACCGATATTGTGGATTATGTGTCCGCGATTGATGAAGCTGACTATGTCATTGCTCAGGCGAATGCGGCGACCAATGCAGAAGGTCAGTTGACCGATGATTTCGTGCCAGCGCGTTTCCAAAACGAGTTTACGCTGAAGCAAGCTAGTGAAGTCCAATATATGGATATTTCACCAAAGCAAATCGTTTCGGTTGCGGCCTCGTTGATTCCTTTCCTAGAGCATGACGATGCCAACCGCGCCCTCATGGGTTCGAACATGCAACGTCAAGCAGTGCCGACTTTACGTGCGCAGAAGCCGTTAGTGGGTACGGGTATGGAACGTACCGTTGCCATCGACTCGGGTGTTGCCGTTGTCGCTAAACGTGGTGGCGTGGTGGTATCTTCTGATGCTGCGCGTGTAGTTGTTCGTGTCAATGAAGACGAAATCACCCTGGGTGAAACCGGCGTTGATATCTACAATCTAACCAAATACATGCGTTCAAACCAAAACACCTGTATTAATCAGCGTGTTATCGTCAAAACGGGCGATGTGATCGGTAAGGGTGATGTGTTAGCTGATGGTCCTTCTACTGACTTAGGTGAGTTGGCATTAGGTCAGAACATGCGCATTGCCTTTATGCCATGGAATGGTTACAACTACGAAGACTCGATTTTGATTTCGGAGCGTGTCGTACAAGAAGACCGCTACACCACCATCCATATCGAAGAGTTATCTTGTTTAGCGCGTGACACCAAGTTAGGACCAGAAGAAATTTCTGCGGATATTCCTAACGTTGGTGAGTCAGCCTTAGGCTTGCTTGATGACTGTGGTATGGTTTATGTCGGTGCCAATGTTAAGCCAGGTGATATTCTGGTCGGTAAAGTGACGCCTAAAGGCGAAACACAACTGACACCAGAAGAGAAATTACTGCGTGCTATCTTTGGTGAAAAAGCTTCAGATGTTAAAGATACTTCGTTACGTGTTCCTTCAGGTATTGAAGGTACTGTTATTGATGTTCAGGTGTTCTTGCGTGATGGTGCAGAGAAAGACCGTCGTACGCGCGACATTGAAGAAGCTGAATTGAAAGTGGTTCGCCAAGATTTGCAGGATCAGAAAAAGATTTTGTCACAAGACGTTTACCGTCGTGCTCAATCGTTATTGATTGGTCAGGTGTGCAAAACAGCACCGGTTAAATCGCTGGTTAAACAGATTCTCAATGCCGACAACCTAGCCGAAGTTGAGCCAGCTAAATGGTTGGAAATGACGGTTGCCGATGAAGGTGTTAATCTTCAGTTAGAACAGCTTGCCGCTCAGCTTAAAGCGAAGCATCTTGAATTAGATGAGTTGTTTGAAGCGAAACGTAAAAAGCTCACTCAAGGTGACGATTTACCTGCTGGCGTCATTAAAATGGTTAAGGTTTATGTCGCGGTTAAGCGTCGTATTCAACCAGGTGACAAAATGGCGGGTCGTCATGGTAACAAGGGTGTTATCTCGCGTATTTGTCCGATTGAAGATATGCCATTCGACGAGAACGGTATGCCAGTTGATATCTGTTTGAATCCGCTGGGTGTACCCTCGCGTATGAACGTTGGTCAGATTCTTGAGGTTCATTTGGGTTTGGCAGCTTGGGGCTTGGGTCGTCAATTAGATACGATGTTACGTGAACAACGCCAGCGCCAAGAAATCACCCGTTTCCTTGAGCAGATTTATAATGAATCAGAAGGCCAAACGGTTGACTTCAATCAGTTGAGCGATGCCGAGTTTAGTGAAATGGTGGCGAATCTGCGTGCAGGTGTGCCTTTGGCATCGCCGGTATTTGATGGCGTTTCGGAAGCTGAGATTAAGCGTCTGCTCCGTTTAGCGGGTCAGCCAGAGTCAGGGCAGTTAACCTTGTTTGATGGCCGTACCGGCGAACCTTTCGATCGTAAGGTCAGTGTGGGTTACATGTATTACCTCAAGCTGAACCACTTGGTCGATGACAAAATGCATGCGCGTTCAACAGGTCCTTACAGTCTCGTTACGCAACAGCCATTGGGTGGTAAAGCACAGTTCGGTGGTCAGCGTTTCGGTGAGATGGAGGTTTGGGCACTGGAAGCTTATGGTGCCGCCTTCACCTTACAAGAAATGTTAACGGTTAAATCCGATGACTTAACGGGTCGTACGCAAATGTACAAAAACGTTGTTGATGGTGATGAATACATGAATCCGGGTATGCCAGAGTCATTTAGTGTATTGATGAAAGAAGTCCGTGCCTTAGGTATTGACATTGAACTGGAGCAAGACGAATGA
PROTEIN sequence
Length: 1260
MRSIFPIKAVSGAAELDYVSYRVGVPEFDVKECKQRGATYSAPLRAKLRLVILDKDSPENNRQIKAVKEQEVYLGDVPLMTENGTFIINGTERVIVSQLHRSPGVIFDSDKGKTHSSGKVLFNARIIPYRGSWLDFEFDHHDILFVRIDRRRKLPVTVLLRAMGYDNASILSQFFEETKVSYDGNKFELAIVDSQLKGETATFDIMNGDKLMVEAGKKITAKTIRDFKAAGMETLVVPEEFLLGKALMKDLVDADTGEVIALANDVINQERLEKIKLMSSVNLSLVYTNELDQGAFISETMRLDNTKTALDAWVEIYRMMRPGEPPTAESSEKLFNSLFFSQERYDLSDVGRMKLNRRLHRDHNEGALVLSNDDIIDVIKELITIRNGKSVVDDIDTLANRRVRAVGEMAENAFRVGLVRVERAVRERLNLAESEGLMPQDLINAKPISAAIKEFFGSSQLSQCPIETPEGPNIGLINSLAVYARTNEYGFIETPYRRVVNGQVTDIVDYVSAIDEADYVIAQANAATNAEGQLTDDFVPARFQNEFTLKQASEVQYMDISPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRAQKPLVGTGMERTVAIDSGVAVVAKRGGVVVSSDAARVVVRVNEDEITLGETGVDIYNLTKYMRSNQNTCINQRVIVKTGDVIGKGDVLADGPSTDLGELALGQNMRIAFMPWNGYNYEDSILISERVVQEDRYTTIHIEELSCLARDTKLGPEEISADIPNVGESALGLLDDCGMVYVGANVKPGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGIEGTVIDVQVFLRDGAEKDRRTRDIEEAELKVVRQDLQDQKKILSQDVYRRAQSLLIGQVCKTAPVKSLVKQILNADNLAEVEPAKWLEMTVADEGVNLQLEQLAAQLKAKHLELDELFEAKRKKLTQGDDLPAGVIKMVKVYVAVKRRIQPGDKMAGRHGNKGVISRICPIEDMPFDENGMPVDICLNPLGVPSRMNVGQILEVHLGLAAWGLGRQLDTMLREQRQRQEITRFLEQIYNESEGQTVDFNQLSDAEFSEMVANLRAGVPLASPVFDGVSEAEIKRLLRLAGQPESGQLTLFDGRTGEPFDRKVSVGYMYYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEMLTVKSDDLTGRTQMYKNVVDGDEYMNPGMPESFSVLMKEVRALGIDIELEQDE*