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OR_08142018_10m_0_1um_scaffold_731

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_10m_0_1um_scaffold_731_1
Candidatus Ruthia magnifica, Candidatus Ruthia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..532)
DNA (531bp) protein (177aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu 2 n=1 Tax=Ruthia magnifica subsp. Calyptogena magnifica RepID=EFTU2_RUTMC
Elongation factor Tu 2 {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu 2 {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=413404 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts; Candidatus Ruthia.;" source="Ruthia magnifica subsp. Calyptogena magnifica.;"
OR_08142018_10m_0_1um_scaffold_731_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(597..1232)
DNA (636bp) protein (212aa)
Elongation factor Tu n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D953_THICA
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
OR_08142018_10m_0_1um_scaffold_731_3
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1193..2335)
DNA (1143bp) protein (381aa)
elongation factor G n=1 Tax=Rheinheimera perlucida RepID=UPI00037E6C00
tufA; Elongation factor G (EF-G)
Tax=BJP_IG2158_Methylococcales_50_91
OR_08142018_10m_0_1um_scaffold_731_4
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2289..3236)
DNA (948bp) protein (316aa)
elongation factor G n=1 Tax=Methylophilus methylotrophus RepID=UPI00037F0B59
elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
OR_08142018_10m_0_1um_scaffold_731_5
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3255..3725)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Thiomicrospira arctica RepID=UPI0003796F27
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
30S ribosomal protein S7
OR_08142018_10m_0_1um_scaffold_731_6
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3773..4147)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JV33_9GAMM
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
OR_08142018_10m_0_1um_scaffold_731_7
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4242..8546)
DNA (4305bp) protein (1435aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RPOC_ALKEH
OR_08142018_10m_0_1um_scaffold_731_8
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8543..12322)
DNA (3780bp) protein (1260aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiomicrospira arctica RepID=UPI00035D5B0B
Displaying 8 items

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