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OR_08142018_10m_0_1um_scaffold_260_9

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(7621..8085)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KC04_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 142
  • Evalue 2.40e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 150.0
  • Bit_score: 142
  • Evalue 9.00e-32
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 142
  • Evalue 3.40e-31

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
GTGACTTTACTCGAGAAACTCGATCAATTATTGCGTCCTGTCGTGACAGGATTAAATTACGTATTGTGGGGCATTGAATTCGCGCGTCATGCGCAGTCGGCGACCCTGCGTATTTACATTGACCGCGCTGGTGGTATTACAGTTGATGATTGCGCCCGTGTTTCTCGTCAAGTCAGCGCTTTAATGGATGTGGAAGATCCCATTGATGTGCCTTATCGTTTGGAAGTGTCTTCGCCTGGGTTGGAGCGCTCGTTTTTTAGCTACGATCAGTTGGCTGATTATATCGATGCAGAAATTAAACTTCGCATACATTCTCTGGGTAAGGGAAAGAAACGTAATTTTACCGGTTTTTTACGTCAGCATGCTGACGGTCAGTTGACACTTGAAGATGAAACGGGTCAGCTATTGGTGTTTCCTTGGAGTGATGTTGATAAAGCATCACTAATTGTTCGATTTGATGATTGA
PROTEIN sequence
Length: 155
VTLLEKLDQLLRPVVTGLNYVLWGIEFARHAQSATLRIYIDRAGGITVDDCARVSRQVSALMDVEDPIDVPYRLEVSSPGLERSFFSYDQLADYIDAEIKLRIHSLGKGKKRNFTGFLRQHADGQLTLEDETGQLLVFPWSDVDKASLIVRFDD*