name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_180_60
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43597..44232)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379EA76
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:BAN36056.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_02272018_0_2um_scaffold_180_61
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44421..45194
|
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037656E9
two component heavy metal response transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_180_62
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
45191..46594
|
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036FC468
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_180_63
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46852..47283)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WML7_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
RTP_02272018_0_2um_scaffold_180_64
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47369..48460)
|
Putative uncharacterized protein n=1 Tax=Dickeya zeae (strain Ech1591) RepID=C6CR13_DICZE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT09030.1}; TaxID=561229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
|
|
RTP_02272018_0_2um_scaffold_180_65
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(48460..50331)
|
ABC transporter n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DDS8_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA85663.1}; TaxID=644801 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
|
|
RTP_02272018_0_2um_scaffold_180_66
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(50328..51965)
|
Putative type I restriction-modification system specificity determinant n=1 Tax=Clostridium sp. CAG:122 RepID=R5RPQ4_9CLOT
Putative type I restriction-modification system specificity determinant {ECO:0000313|EMBL:CCZ40599.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
restriction endonuclease S subunit
|
|
RTP_02272018_0_2um_scaffold_180_67
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(51962..53662)
|
DNA methyltransferase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B34C30
Type I restriction-modification system, DNA-methyltransferase subunit M
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
RTP_02272018_0_2um_scaffold_180_68
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(53684..54547)
|
DNA-damage-inducible protein D n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQE6_CHLCH
dinD; DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
RTP_02272018_0_2um_scaffold_180_69
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(54577..57375)
|
hsdR; DEAD/DEAH box helicase (EC:3.1.21.3)
DEAD/DEAH box helicase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S59_NITEU
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
RTP_02272018_0_2um_scaffold_180_70
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57807..59336)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037ED88C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97685.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_180_71
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
59378..60697
|
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJK4_GALCS
cytochrome c biogenesis protein transmembrane region
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
|
|
RTP_02272018_0_2um_scaffold_180_72
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(60725..62152)
|
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RNA helicase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D14C6
DEAD/DEAH box helicase
|
|
RTP_02272018_0_2um_scaffold_180_trna_2
unknown
|
Not on your lists |
comp(62298..62369)
|
transferRNA Val
|
|
RTP_02272018_0_2um_scaffold_180_73
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62615..64018
|
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rule:MF_00022};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glutamyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003823A79
|
|
RTP_02272018_0_2um_scaffold_180_trna_1
unknown
|
Not on your lists |
64049..64121
|
transferRNA Thr
|
|
RTP_02272018_0_2um_scaffold_180_74
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64227..64595)
|
Putative Long-chain-fatty-acid--CoA ligase n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GDM3_DESGI
putative Long-chain-fatty-acid--CoA ligase
Putative Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AGW14216.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
|
|
RTP_02272018_0_2um_scaffold_180_75
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64653..65165)
|
Hydrogenase maturation protease n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU98_9GAMM
hydrogenase maturation protease
Tax=RBG_16_Gamma2_65_34_curated
|
|
RTP_02272018_0_2um_scaffold_180_76
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(65169..66467)
|
Nickel-dependent hydrogenase large subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU97_9GAMM
nickel-dependent hydrogenase large subunit
Tax=RBG_16_Gamma2_65_34_curated
|
|
RTP_02272018_0_2um_scaffold_180_77
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(66464..67243)
|
Sulfhydrogenase delta subunit n=1 Tax=mine drainage metagenome RepID=E6QAH6_9ZZZZ
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=RBG_16_Gamma2_65_34_curated
|
|
RTP_02272018_0_2um_scaffold_180_78
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(67244..68077)
|
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D8ABD
hoxU; [NiFe] hydrogenase subunit gamma
Tax=RBG_16_Gamma2_65_34_curated
|
|
RTP_02272018_0_2um_scaffold_180_79
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(68070..69179)
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAH4_9ZZZZ
(NiFe) hydrogenase subunit beta
Tax=RBG_16_Gamma2_65_34_curated
|
|
RTP_02272018_0_2um_scaffold_180_80
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(69324..69656)
|
Putative membrane-associated protein id=4524196 bin=GWC2_Nitrospirae-rel_56_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
|
|
RTP_02272018_0_2um_scaffold_180_81
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(69884..70177)
|
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N862_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR04763.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_180_82
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(70471..71136)
|
Uncharacterized protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7P1H1_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
|
|
RTP_02272018_0_2um_scaffold_180_83
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(71224..72003)
|
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QMI0_RALPI
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
|
|
RTP_02272018_0_2um_scaffold_180_84
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(72000..73187)
|
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYP6_NITHN
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EXI73767.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_180_85
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(73232..74131)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C1493
universal stress protein
Universal stress protein {ECO:0000313|EMBL:AAZ97688.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_180_86
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(74216..75217)
|
arsenic transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037A6957
ACR3 family arsenite transporter
Putative arsenite transporter, ACR3 family {ECO:0000313|EMBL:AAZ97379.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|