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RTP_02272018_0_2um_scaffold_180_66

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(50328..51965)

Top 3 Functional Annotations

Value Algorithm Source
Putative type I restriction-modification system specificity determinant n=1 Tax=Clostridium sp. CAG:122 RepID=R5RPQ4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 371.0
  • Bit_score: 335
  • Evalue 6.90e-89
Putative type I restriction-modification system specificity determinant {ECO:0000313|EMBL:CCZ40599.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 371.0
  • Bit_score: 335
  • Evalue 9.70e-89
restriction endonuclease S subunit similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 537.0
  • Bit_score: 293
  • Evalue 1.10e-76

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Taxonomy

Clostridium sp. CAG:122 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1638
ATGAAACTAGTCCCAATAAAAGACGTTATTACAGACAAAATCTCGGGCGAATGGGGAGATGAGGCAATTAATGGAAAAGGTATTGTGGTAATTCGCACTGCCAATTTTCTAAACTCCGGAAAAATCAACTTTTCCAACCTGGTTCGTCGAGAAGTTGACAACAAGAAGGTCACAAAAAAGAGACTGCTTTCTGGCGACATCATTATTGAGAAGTCTGGCGGCAGCCCCACACAGCCAGTCGGGCGAGTTGTGCTCTTCCGAAGTCCTGATAACGACACATATCTTTGCAACAACTTCACATCGATTCTTCGTCCAAACAAGAATGAAGTTCATCCCGAGTATCTATTTTACGTACTTCACAATAATCACAAAAATGGAAGAACACTTCGCCACCAAAACAAAACAACGGGAATAATTAATCTGAAACTGGATAGCTATCTGGATTCAGAAATCCCACTTCCACCCCTCGACGACCAAATCCGCATTGCCCATCTGCTCGGCAAAGTGGAAGGGCTCATCGCCCAGCGCAAACAAAACCTGCAACAACTCGACGACCTGCTCAAGAGCGTGTTTCTGGAGATGTTTGGCGATCCGGTGCGGAATGAGAAGGGGTGGAAACCTGATTCGCTAGCAAATTTTGGTACGTTCAAAAATGGCCTAAATTATGGCAAAGGTGAATCAGGCGTTCAGGTGCGATGCTTGGGTGTTGGTGATTTCAAGGCTCTGTCAAAGATAACCAATGTTAACTGCTTGCCGACAATCACCCTCGATTCAGAGCCGCCCGATGACTATATGCTGCGAAATGGGGATCTCATATTTGTTCGGTCAAACGGAAACAGAGATTTGGTCGGAAGGTGTATTGCGATTTATCCAAACGAAGAGAGGGTCGCATTTAGCGGGTTCTGCATAAGATTTAGGATCACAGAATTTTCTGTTGACTCGACGTATATCACTCACTTATTTCGAGCCGCGTCTTTCCGGAGGTCTCTGTTACAGGGCGGCCAAGGTGCCAATATTCAGAACATTAACCAGAAAAGCCTTTCGGAATTGGCAATACCAATACCTCCTCCCGAACTACAGCGCCAGTTTTCCAGCGTCGTCGAGAAAGTCGAAGGCATCAAATCCCGCTACCAGCAAAGCCTCATCGATCTCGAAGTCCTCTACGGCGCCTTGAGTCAGCACTCATTCAAGGGCGAACTGGATTTGTCACGCGTGCTTTGGCCGGGCACAAAACCTGAGGAAGAGAAAGCCGTGGTTACAGAACCCTTGCACGCTCACGCCGAACAAGGCCTTGCCATCAACCTGCCCGACACCGACAACTTGCTCGATGCCCTCGAGAACGCCGAGGCACGGGTGGCATTGATGGCGCAATGGCTGGAGGCCTATCGAGTCCAACTGGGCAACACGCCGTTTTCGGTTCAGCGCTTCATGACGGCGGCGCAAACCCGCTTGGCTGAGCTGCACCCGGAAACCGACTTCGAGCTGGGCGCTAACGACTACGAGCACATCAAGACCTGGGTGTTCGAGGCGCTGGCTGATGGTCGTCTCCAGCAATCGCGCGACATCACCGGGCACGATGAAAATGGGGCGGTGATTTTTGGCAATCTCATGGAGATCAAGAACGGAGCCCTGCCTTGA
PROTEIN sequence
Length: 546
MKLVPIKDVITDKISGEWGDEAINGKGIVVIRTANFLNSGKINFSNLVRREVDNKKVTKKRLLSGDIIIEKSGGSPTQPVGRVVLFRSPDNDTYLCNNFTSILRPNKNEVHPEYLFYVLHNNHKNGRTLRHQNKTTGIINLKLDSYLDSEIPLPPLDDQIRIAHLLGKVEGLIAQRKQNLQQLDDLLKSVFLEMFGDPVRNEKGWKPDSLANFGTFKNGLNYGKGESGVQVRCLGVGDFKALSKITNVNCLPTITLDSEPPDDYMLRNGDLIFVRSNGNRDLVGRCIAIYPNEERVAFSGFCIRFRITEFSVDSTYITHLFRAASFRRSLLQGGQGANIQNINQKSLSELAIPIPPPELQRQFSSVVEKVEGIKSRYQQSLIDLEVLYGALSQHSFKGELDLSRVLWPGTKPEEEKAVVTEPLHAHAEQGLAINLPDTDNLLDALENAEARVALMAQWLEAYRVQLGNTPFSVQRFMTAAQTRLAELHPETDFELGANDYEHIKTWVFEALADGRLQQSRDITGHDENGAVIFGNLMEIKNGALP*