name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_264_1
Pseudomonas sp. GM102, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(248..664)
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM102 RepID=J2VKB0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM04128.1}; TaxID=1144321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM102.;"
hypothetical protein
|
|
RTP_02272018_0_2um_scaffold_264_2
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1112..1645
|
Transposase IS4 family protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZUG7_ACICS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81323.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
|
|
RTP_02272018_0_2um_scaffold_264_3
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1785..2087)
|
plasmid maintenance system antidote protein id=12496308 bin=THIO_MID species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ADL55474.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
|
|
RTP_02272018_0_2um_scaffold_264_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2223..2432)
|
transcriptional antiterminator, Rof id=12493108 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional antiterminator, Rof
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2429..3382)
|
Protease id=1342850 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3379..3729)
|
(2Fe-2S)-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F4CD3
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3708..4364)
|
Putative hydrolase id=1342848 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4348..5382)
|
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase C n=1 Tax=Thiobacillus thioparus RepID=UPI000368ADF0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5706..8297
|
RNAse E (EC:3.1.4.-)
ribonuclease E n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0F99
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8369..8866)
|
protein tyrosine phosphatase (EC:3.1.3.48)
phosphotyrosine protein phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E7E42
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8859..10886)
|
excinuclease ABC subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI0003794EB7
excinuclease ABC subunit B
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10959..12152
|
aminotransferase (EC:2.6.1.-)
aspartate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003626F22
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12185..13462
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036656BF
cyclic nucleotide-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13702..14940
|
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase id=1325887 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_trna_1
unknown
|
Not on your lists |
14987..15059
|
transferRNA Asn
|
|
RTP_02272018_0_2um_scaffold_264_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15610..16155
|
Putative uncharacterized protein id=1325889 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_264_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16761..19088
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367FAD9
Uncharacterized protein {ECO:0000313|EMBL:GAO34713.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
diguanylate cyclase/phosphodiesterase
|
|
RTP_02272018_0_2um_scaffold_264_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19151..19777
|
phosphoribosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E408F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19774..20424)
|
DeoR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037158F6
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20421..21515)
|
pyruvate formate lyase-activating protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A35D7
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_264_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21512..22069)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DD947
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22070..22870)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377B80A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_264_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23250..24794
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003729008
sensor protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_264_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24992..25477
|
two component LuxR family transcriptional regulator; K07689 two-component system, NarL family, invasion response regulator UvrY id=12498706 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
LuxR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_264_24
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25650..26102)
|
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036B5DC8
hypothetical protein
Tax=GWA2_Gallionellales_60_18_curated
|
|
RTP_02272018_0_2um_scaffold_264_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26545..28125
|
diguanylate cyclase id=12498707 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_264_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28571..29725
|
Flagellin-like protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IYG2_COMT2
Flagellin {ECO:0000313|EMBL:AKC87993.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
flagellin-like protein
|
|
RTP_02272018_0_2um_scaffold_264_27
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29835..30185
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FEBAA
flagellar protein FlaG protein
Flagellar protein FlaG protein {ECO:0000313|EMBL:ACT49997.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
|
|
RTP_02272018_0_2um_scaffold_264_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30196..32196
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376E53B
Flagellar hook protein FliD {ECO:0000313|EMBL:KIO48055.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
flagellar hook-associated 2-like
|
|
RTP_02272018_0_2um_scaffold_264_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32210..32641
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AEAD6
flagellar protein FliS
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|