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RTP_02272018_0_2um_scaffold_366

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Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_366_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22771..24225)
DNA (1455bp) protein (485aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] id=12495694 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbb3-type cytochrome c oxidase subunit I
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_366_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24345..24935)
DNA (591bp) protein (197aa)
photosynthetic protein synthase I n=1 Tax=Thiobacillus denitrificans RepID=UPI0003809900
SCO1/SenC family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_366_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24932..25396)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1308430 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
BadM/Rrf2 family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25481..26377)
DNA (897bp) protein (299aa)
protoheme IX farnesyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003776831
protoheme IX farnesyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_366_31
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26380..27363)
DNA (984bp) protein (328aa)
Putative cytochrome aa3 oxidase assembly protein,related to CtaA id=1308428 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome aa3 oxidase assembly protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_32
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27366..27929)
DNA (564bp) protein (188aa)
transmembrane protein id=12494821 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_33
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28023..28742)
DNA (720bp) protein (240aa)
Surfeit locus 1 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE4_9PROT
surfeit locus 1
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
RTP_02272018_0_2um_scaffold_366_34
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28785..28988
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7P8_9PROT
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
RTP_02272018_0_2um_scaffold_366_35
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29011..29859)
DNA (849bp) protein (283aa)
Cytochrome c oxidase subunit III n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP97_ACCPU
cytochrome c oxidase subunit III
Tax=CG_Rhodof_03
RTP_02272018_0_2um_scaffold_366_36
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29888..30454)
DNA (567bp) protein (189aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 id=2161103 bin=GWE2_Gallionellales_58_10 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
cytochrome C oxidase assembly protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
RTP_02272018_0_2um_scaffold_366_37
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30768..32363)
DNA (1596bp) protein (532aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome oxidase subunit I n=1 Tax=Methylophilus RepID=UPI00035EF179
Tax=CG_Rhodof_03
RTP_02272018_0_2um_scaffold_366_38
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32400..33560)
DNA (1161bp) protein (387aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE7_9PROT
RTP_02272018_0_2um_scaffold_366_39
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33616..34002)
DNA (387bp) protein (129aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 id=1308419 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_40
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34451..35185)
DNA (735bp) protein (245aa)
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AD9D6
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_366_41
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35182..36288)
DNA (1107bp) protein (369aa)
malonyl-CoA O-methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382DBF7
biotin biosynthesis protein BioC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_366_42
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36281..37027)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C0A1B
BioH
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_366_43
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(37014..38201)
DNA (1188bp) protein (396aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47] id=12494191 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
RTP_02272018_0_2um_scaffold_366_44
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(38198..39151)
DNA (954bp) protein (318aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] id=12494192 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
biotin synthase (EC:2.8.1.6)
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
RTP_02272018_0_2um_scaffold_366_45
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39144..39602)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3115
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_46
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39819..40349
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=1362507 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_47
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40441..41568)
DNA (1128bp) protein (376aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003778481
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_366_48
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41579..42658)
DNA (1080bp) protein (360aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=1318106 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_49
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42786..43193
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003729850
predicted nucleotidyltransferase
Tax=RBG_16_Gamma2_64_11_curated
RTP_02272018_0_2um_scaffold_366_50
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43210..44178
DNA (969bp) protein (323aa)
Glycosyl transferase family 2 id=1318107 bin=GWE1_T_denit_62_9 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
family 2 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_366_51
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44400..44789
DNA (390bp) protein (130aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YFU4_THIV6
polysaccharide/polyol phosphate ABC transporter ATPase
Tax=RBG_16_Gallionellales_57_15_curated
RTP_02272018_0_2um_scaffold_366_52
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44903..45196
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000362C7B5
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_366_53
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45183..45338
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FB80D7
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying items 31-57 of 57 in total

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