name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_02272018_0_2um_scaffold_366_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..126)
|
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=EFTU_THIDA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_trna_4
unknown
|
Not on your lists |
comp(247..318)
|
transferRNA Thr
|
|
RTP_02272018_0_2um_scaffold_366_trna_3
unknown
|
Not on your lists |
comp(368..438)
|
transferRNA Gly
|
|
RTP_02272018_0_2um_scaffold_366_trna_2
unknown
|
Not on your lists |
comp(521..602)
|
transferRNA Tyr
|
|
RTP_02272018_0_2um_scaffold_366_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(674..1765)
|
GTP-binding protein YchF n=1 Tax=Thiobacillus thioparus RepID=UPI0003647F22
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1800..2390)
|
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1308456 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2433..3053)
|
50S ribosomal protein L25 id=1308455 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L25
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3145..4095)
|
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=1308454 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_trna_1
unknown
|
Not on your lists |
comp(4169..4240)
|
transferRNA Gln
|
|
RTP_02272018_0_2um_scaffold_366_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4252..5085)
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E83C9
|
|
RTP_02272018_0_2um_scaffold_366_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5082..5645)
|
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB id=12494782 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer membrane lipoprotein LolB
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5645..7423)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B597E
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7645..8457
|
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase id=1308450 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8538..10502
|
Putative uncharacterized protein id=1308449 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10511..10762)
|
ferredoxin protein id=12495678 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ferredoxin protein
Probable ferredoxin protein {ECO:0000313|EMBL:AAZ96334.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_366_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10781..11263)
|
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
phosphopantetheine adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C514B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_366_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11266..11841)
|
Putative uncharacterized protein id=1308446 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_366_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11831..13153)
|
zinc protease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BB06E
insulinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_366_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13143..14501)
|
peptidase M16 n=1 Tax=Thiobacillus denitrificans RepID=UPI000379CF02
insulinase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14631..15629
|
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor id=12494795 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_02272018_0_2um_scaffold_366_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15643..16305
|
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein id=12494796 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cell division ATP-binding protein FtsE
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16302..17210
|
Cell division protein FtsX id=1308441 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cell division protein FtsX
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17305..18150
|
RNA polymerase sigma factor id=1308440 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sigma-70 factor
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18246..18353)
|
id=12495687 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18388..18573)
|
Cytochrome oxidase maturation protein cbb3-type id=1308438 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome oxidase maturation protein cbb3-type
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_366_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18570..19346)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381FE4C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_02272018_0_2um_scaffold_366_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19343..20779)
|
(Fe-S)-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707171
(Fe-S)-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20856..21791)
|
cytochrome C oxidase subunit III n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD88D
cytochrome c oxidase cbb3-type subunit III
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_02272018_0_2um_scaffold_366_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21788..21985)
|
Putative uncharacterized protein id=1308434 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_02272018_0_2um_scaffold_366_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22007..22753)
|
peptidase S41 n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EC298
cbb3-type cytochrome c oxidase subunit II
Cytochrome C oxidase, mono-heme subunit/FixO {ECO:0000313|EMBL:AAZ96292.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|