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RTP_02272018_0_2um_scaffold_664

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_664_1
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..617
DNA (615bp) protein (205aa)
Glutamine amidotransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZQ9_9PROT
glutamine amidotransferase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
RTP_02272018_0_2um_scaffold_664_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617..1801
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036428D3
MFS permease
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_664_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1798..2439
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381517B
type 11 methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_664_4
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2653..5277)
DNA (2625bp) protein (875aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003755EC1
diguanylate cyclase
Tax=RBG_16_Gammaproteobacteria_57_12_curated
RTP_02272018_0_2um_scaffold_664_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5274..5690)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003705130
response regulator receiver protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_664_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5692..7113)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003632892
multi-sensor signal transduction histidine kinase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_02272018_0_2um_scaffold_664_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7320..7442)
DNA (123bp) protein (41aa)
hypothetical protein; K03699 putative hemolysin id=12498213 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Membrane protein {ECO:0000313|EMBL:KIF82689.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_664_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..8361
DNA (729bp) protein (243aa)
Transcriptional Regulator, GntR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGJ6_THIDA
GntR family transcriptional regulator
Transcriptional Regulator, GntR family {ECO:0000313|EMBL:AAZ98254.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8397..9266
DNA (870bp) protein (290aa)
Phosphonate-binding periplasmic protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGJ7_THIDA
phosphonate-binding periplasmic protein
Tax=CG_Delta_05
RTP_02272018_0_2um_scaffold_664_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9320..10099
DNA (780bp) protein (260aa)
Phosphonates import ATP-binding protein PhnC n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PHNC_THIDA
phosphate/phosphonate ABC transporter ATPase
Tax=CG_Delta_05
RTP_02272018_0_2um_scaffold_664_11
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10877
DNA (816bp) protein (272aa)
ABC phosphonate permease n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGJ9_THIDA
phosphonate ABC transporter permease
Tax=CG_Delta_05
RTP_02272018_0_2um_scaffold_664_12
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10874..11683
DNA (810bp) protein (270aa)
ABC phosphonate permease n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK0_THIDA
phosphonate ABC transporter permease
Tax=CG_Delta_05
RTP_02272018_0_2um_scaffold_664_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11683..12150
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK1_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98249.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12140..12706
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK2_THIDA
phnH; carbon-phosphorus lyase complex subunit
Uncharacterized protein {ECO:0000313|EMBL:AAZ98248.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12703..13839
DNA (1137bp) protein (379aa)
Phosphonate metabolism protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK3_THIDA
phosphonate metabolism protein
Phosphonate metabolism protein {ECO:0000313|EMBL:AAZ98247.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13836..14729
DNA (894bp) protein (298aa)
Phosphonate metabolism protein PhnJ n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK4_THIDA
phosphonate metabolism protein PhnJ
Phosphonate metabolism protein PhnJ {ECO:0000313|EMBL:AAZ98246.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14726..15556
DNA (831bp) protein (277aa)
ABC phosphonate transport system ATPase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK5_THIDA
phosphonate ABC transporter ATPase
ABC phosphonate transport system ATPase {ECO:0000313|EMBL:AAZ98245.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15567..16289
DNA (723bp) protein (241aa)
ABC phosphonate transport system ATPase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK6_THIDA
phosphonate ABC transporter ATPase
ABC phosphonate transport system ATPase {ECO:0000313|EMBL:AAZ98244.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16286..17440
DNA (1155bp) protein (385aa)
Amidohydrolase-like protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK7_THIDA
amidohydrolase
Amidohydrolase-like protein {ECO:0000313|EMBL:AAZ98243.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17433..18014
DNA (582bp) protein (194aa)
guanylate kinase (EC:2.7.4.8)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000255|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000255|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000255|HAMAP-Rule:MF_00836}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=PHNN_THIDA
RTP_02272018_0_2um_scaffold_664_21
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18005..18778
DNA (774bp) protein (258aa)
Phosphonate metabolism protein, PhnP n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGK9_THIDA
phnP; carbon-phosphorus lyase complex accessory protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
RTP_02272018_0_2um_scaffold_664_22
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18784..19641
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQA0_POLNA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
RTP_02272018_0_2um_scaffold_664_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20146..20589)
DNA (444bp) protein (148aa)
heat shock protein Hsp20 n=1 Tax=Thiobacillus thioparus RepID=UPI00037DFE5E
heat shock protein Hsp20
Small heat shock protein {ECO:0000313|EMBL:AAZ98265.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_664_24
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20722..21222
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACY1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
RTP_02272018_0_2um_scaffold_664_25
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21394..21846)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI75801.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
Putative uncharacterized protein id=1262572 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RTP_02272018_0_2um_scaffold_664_26
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21919..23439)
DNA (1521bp) protein (507aa)
aldehyde dehydrogenase (EC:1.2.1.3)
aldehyde dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI000375BF3B
Tax=BJP_IG2103_Rhodocyclales_63_50
RTP_02272018_0_2um_scaffold_664_27
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23736..25679
DNA (1944bp) protein (648aa)
Transcriptional activator of acetoin/glycerol metabolism n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNL3_AZOSU
transcriptional activator of acetoin/glycerol metabolism
Transcriptional activator of acetoin/glycerol metabolism {ECO:0000313|EMBL:AEV25858.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
RTP_02272018_0_2um_scaffold_664_28
unknown

Not on your lists

25700..26062
DNA (363bp) protein (121aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_664_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26685..27038)
DNA (354bp) protein (118aa)
Major facilitator family transporter (Permease) id=1342777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_664_30
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27044..27463
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J2X0_PSEUL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK78846.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
Displaying items 1-30 of 43 in total

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