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RTP_02272018_0_2um_scaffold_669

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_669_1
unknown

Not on your lists

comp(153..350)
DNA (198bp) protein (66aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_669_2
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

568..768
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI000377D5AA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABC32310.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
RTP_02272018_0_2um_scaffold_669_3
Pseudomonas sp. CFII68, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1110..2471
DNA (1362bp) protein (454aa)
Fic family protein n=1 Tax=Pseudomonas sp. CFII68 RepID=S6GZP5_9PSED
fic; hypothetical protein
Fic family protein {ECO:0000313|EMBL:EPJ78383.1}; TaxID=911243 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII68.;"
RTP_02272018_0_2um_scaffold_669_4
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3039..4553
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IH11_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ12529.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
RTP_02272018_0_2um_scaffold_669_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4771..5226)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F219C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_669_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5223..6269)
DNA (1047bp) protein (349aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CE718
cytochrome c
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_669_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..9474)
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B75DC
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_669_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9490..9930)
DNA (441bp) protein (147aa)
Response regulator receiver domain protein (CheY) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJL2_THIDA
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY) {ECO:0000313|EMBL:AAZ97145.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_669_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..12437)
DNA (2511bp) protein (837aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D48D4
RTP_02272018_0_2um_scaffold_669_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12803..14086
DNA (1284bp) protein (428aa)
MgtC family protein id=1345797 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:AAZ96875.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_669_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14156..15205
DNA (1050bp) protein (350aa)
peptide chain release factor 1 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003646C21
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_669_12
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15208..16512
DNA (1305bp) protein (435aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI73849.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein id=12494458 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
RTP_02272018_0_2um_scaffold_669_13
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16509..17189
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00037A035F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_02272018_0_2um_scaffold_669_14
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17189..19972
DNA (2784bp) protein (928aa)
SMC domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS01_SIDLE
SMC domain protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_02272018_0_2um_scaffold_669_15
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19965..21188
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBU3_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_02272018_0_2um_scaffold_669_16
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21268..21567
DNA (300bp) protein (100aa)
SpoVT/AbrB domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTJ9_POLNA
SpoVT/AbrB domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
RTP_02272018_0_2um_scaffold_669_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21572..21970
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037835F9
PilT domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_669_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22469..25177)
DNA (2709bp) protein (903aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SET0_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98228.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_669_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25205..27010)
DNA (1806bp) protein (602aa)
adenine-specific DNA methylase (EC:2.1.1.72)
Adenine specific DNA methylase {ECO:0000313|EMBL:AAZ98229.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AAZ98229.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Adenine specific DNA methylase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SES9_THIDA
RTP_02272018_0_2um_scaffold_669_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26959..27288)
DNA (330bp) protein (110aa)
hypothetical protein id=12494655 bin=THIO_HI species=Burkholderia sp. SJ98 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
Displaying 20 items

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