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RTP_02272018_0_2um_scaffold_1044

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1044_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2647)
DNA (2646bp) protein (882aa)
formate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EACDD
DMSO reductase subunit A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1044_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2864..3382)
DNA (519bp) protein (173aa)
Uncharacterized protein id=1374516 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thiol-disulfide isomerase-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..4080)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A44AF
thiol-disulfide isomerase-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1044_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4785)
DNA (495bp) protein (165aa)
Molybdenum cofactor biosynthesis protein C id=1374518 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
GTP cyclohydrolase subunit MoaC
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4857..6275
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F1E2D
M48 family peptidase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6479..6868
DNA (390bp) protein (130aa)
cytochrome CBB3 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003631A3A
monoheme cytochrome SoxX
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6906..7373
DNA (468bp) protein (156aa)
sulfur oxidation protein SoxY n=1 Tax=Thiobacillus thioparus RepID=UPI000381A352
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1044_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7435..7749
DNA (315bp) protein (105aa)
sulfur oxidation protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F3BCA
sulfur compound chelating protein SoxZ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1044_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7820..8665
DNA (846bp) protein (282aa)
SoxAX cytochrome complex subunit A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL98_THIDA
diheme cytochrome SoxA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1044_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8829..10571
DNA (1743bp) protein (581aa)
Probable sulfur oxidation signal protein, twin-arginine translocation pathway id=1345670 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfate thiol esterase SoxB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_11
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10654..12081)
DNA (1428bp) protein (476aa)
Putative uncharacterized protein id=1345669 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Gallionellales_57_15_curated
RTP_02272018_0_2um_scaffold_1044_12
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12075..13805)
DNA (1731bp) protein (577aa)
von Willebrand factor type A id=1345668 bin=GWE1_T_denit_62_9 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
von Willebrand factor A
Tax=RBG_16_Gallionellales_57_15_curated
RTP_02272018_0_2um_scaffold_1044_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13802..14773)
DNA (972bp) protein (324aa)
Putative Von Willebrand factor, type A id=1345667 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
von Willebrand factor A
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14766..15194)
DNA (429bp) protein (143aa)
hypothetical protein id=1347989 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1044_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15187..16152)
DNA (966bp) protein (322aa)
Putative uncharacterized protein id=1347990 bin=GWE1_T_denit_62_9 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16149..17105)
DNA (957bp) protein (319aa)
Putative AAA ATPase id=1345664 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1044_17
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17275..17499
DNA (225bp) protein (75aa)
CopG family transcripitonal regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QC84_RALPI
CopG family transcripitonal regulator
CopG family transcripitonal regulator {ECO:0000313|EMBL:AGW88584.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
RTP_02272018_0_2um_scaffold_1044_18
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17483..17752
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETC7_CUPNN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI75598.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
RTP_02272018_0_2um_scaffold_1044_19
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17831..17929
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Edwardsiella tarda C07-087 RepID=M4TMZ5_EDWTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH75299.1}; TaxID=1288122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
Displaying 19 items

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