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RTP_02272018_0_2um_scaffold_1285

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1285_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1135)
DNA (1134bp) protein (378aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=1326653 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1285_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1203..1880)
DNA (678bp) protein (226aa)
Ribosomal RNA large subunit methyltransferase E id=1326654 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cell division protein FtsJ
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1285_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1922..2218
DNA (297bp) protein (99aa)
RNA-binding protein YhbY n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AA623
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1285_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2243..2701)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=1326656 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1285_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2704..3180)
DNA (477bp) protein (159aa)
transcription elongation factor GreA n=1 Tax=Thiobacillus thioparus RepID=UPI0003626F6A
GreA/GreB family elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1285_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3214..6420)
DNA (3207bp) protein (1069aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
carbamoyl phosphate synthase large subunit n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E22E
carbamoyl-phosphate synthase large subunit
RTP_02272018_0_2um_scaffold_1285_7

Not on your lists

comp(6423..7562)
DNA (1140bp) protein (380aa)
carbamoyl phosphate synthase small subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC0E
Carbamoyl-phosphate synthase small chain {ECO:0000313|EMBL:KKS79163.1}; TaxID=1618624 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWE1_42_9.;"
carbamoyl-phosphate synthase small subunit
RTP_02272018_0_2um_scaffold_1285_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7715..9130)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003643EE5
HlyD-family type I secretion protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1285_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9142..11340)
DNA (2199bp) protein (733aa)
Protein-1 exporter id=1323110 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Type I secretion system ABC transporter, HlyB family
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1285_10
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11425..12027)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZKH9_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD61995.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1285_11
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12131..12871)
DNA (741bp) protein (247aa)
DNA replication protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N554_9BURK
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:AGX86380.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
RTP_02272018_0_2um_scaffold_1285_12
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12937..14460)
DNA (1524bp) protein (508aa)
Transposase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAZ6_9BURK
transposase
Transposase {ECO:0000313|EMBL:AGX88485.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
Displaying 12 items

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