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RTP_02272018_0_2um_scaffold_342_28

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 27528..29243

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB id=12493282 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 571.0
  • Bit_score: 1053
  • Evalue 0.0
type IV pilus assembly protein, PilB similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 571.0
  • Bit_score: 1038
  • Evalue 0.0
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 571.0
  • Bit_score: 1038
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGGCTGCTGTGACAAATAACATCAATTTGACTGGACTGGCACGCGCCATGGTCAACAATGGCTGGCTGTCGGAGGCGGATGCCGAGGGCGTGTGGAAGCGCGCCAACCAGTCGGGCGATTCATTTGTAACCGAACTCATCAAGGGCCAGCGATTCAAGGCCGGCCAGGTTGCCGAGTTTGCGGCGGTTTCATTCGGCTTCCCCTACATGGACCTGAACGCTATGGATACCGAGAGCTTGCCGCAGGGGCTGCTCGATCCGAAGCTGGTTCAGAAGCGCCGCGTGGTGGCGCTTTATCAGCGTGGCAACAAGCTGTATGTGGCGACCTCCGACCCCACCCACATGCAGGCGCTGGATGAGGTGAAATTCCAGACCGGCCAGGCGGTTGAGCCGGTCGTGGTGGAAGACGACAAGCTGGGCAAGCTGATCGCCAAGGCGGACGAGGCTGAAGAAAACACGATGGCCGTGTTGAATGCCGAAGAACTCAATCTGGATTTTGCGGATGAAGAGTCCGCGGCTGCGCAACAGGATACCGGCGGCATCGAAATCGACGATGCGCCGGTAGTGCGTTACCTGCAAAAGATCATGCTCGACGCGATCAACCAGGGGGCATCCGACATCCACCTCGAACCCTACGAAAAATTCTATCGCATACGCTACCGACGCGACGGCATCCTGGCCGAGGTGGCGCAGCCGCCGATGGCGATCAAGGACAAGGTCGCATCGCGCATCAAGGTGTTGTCGCGGCTGGATATCTCGGAGAAGCGCGTGCCGCAGGATGGCCGCATGAAAATGGTGCTGTCGAAAAACCGCGCCATCGATTTTCGGGTCAGCACCCTGCCCACCCTGTACGGCGAAAAAATCGTCATGCGGATTCTGGACCCGACCAGCGCACAGTTGGGGATCGAGGCCCTGGGTTACGAGCCGTTCCAGAAAGAACTGCTGATGAATGCCGTGCAACGCCCCTACGGCATGGTGCTGGTGACCGGTCCCACCGGTTCCGGCAAGACGGTGTCGCTCTACACCTGCCTCAATATTCTCAACAAGCCCGACGTCAACATCTCGACCGCGGAAGACCCGGTGGAAATCCAGTTGCCCGGAATCAACCAGGTCAACGTTAACGACAAGGCCGGGCTGACTTTTTCGGCTGCGCTGAAATCCTTCCTGCGGCAGGATCCCGACGTCATCATGGTCGGCGAGATCCGCGATCTGGAAACTGCCGACATCGCCATCAAGGCCGCGCAAACCGGCCACATGGTGATGTCCACCCTGCACACCAACGATGCCCCAGGCACCTTGACCCGTCTGCTCAACATGGGGGTGGCCCCCTTCAACGTGGCATCCTCGGTGATCCTGATTACCGCCCAGCGGCTGGGACGGAAGCTGTGCAGTTGCAAACAGCCTGCCGATATCCCGAACGAAGCCCTGCTGGCGGCCGGCTTCACCGAAGAACAACTGGATGGCTCCTGGAAACCCTACAAACCGGCGGGCTGCGAGATTTGCGGCGGCTCCGGCTACAAGGGACGGGTAGGCATTTATCAGGTGATGCCGATTACCGACGCCATGACGCGGATCATCCTCAAGGGCGGCAATGAATCCGATATTTCCGATCAGGCGCGGCGCGAAGGCGTGCTCGACCTGCGCCAGGCCGGTTTGTTGAAAGTCAAATCCGGACTCACCTCGCTGGAAGAGATCGAGGCTGTTACCAATCTTTAG
PROTEIN sequence
Length: 572
MAAVTNNINLTGLARAMVNNGWLSEADAEGVWKRANQSGDSFVTELIKGQRFKAGQVAEFAAVSFGFPYMDLNAMDTESLPQGLLDPKLVQKRRVVALYQRGNKLYVATSDPTHMQALDEVKFQTGQAVEPVVVEDDKLGKLIAKADEAEENTMAVLNAEELNLDFADEESAAAQQDTGGIEIDDAPVVRYLQKIMLDAINQGASDIHLEPYEKFYRIRYRRDGILAEVAQPPMAIKDKVASRIKVLSRLDISEKRVPQDGRMKMVLSKNRAIDFRVSTLPTLYGEKIVMRILDPTSAQLGIEALGYEPFQKELLMNAVQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPDVNISTAEDPVEIQLPGINQVNVNDKAGLTFSAALKSFLRQDPDVIMVGEIRDLETADIAIKAAQTGHMVMSTLHTNDAPGTLTRLLNMGVAPFNVASSVILITAQRLGRKLCSCKQPADIPNEALLAAGFTEEQLDGSWKPYKPAGCEICGGSGYKGRVGIYQVMPITDAMTRIILKGGNESDISDQARREGVLDLRQAGLLKVKSGLTSLEEIEAVTNL*