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RTP_02272018_0_2um_scaffold_410_2

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(136..1104)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 311.0
  • Bit_score: 548
  • Evalue 1.10e-153
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 311.0
  • Bit_score: 548
  • Evalue 5.60e-153
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus thioparus RepID=UPI000364D88F similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 321.0
  • Bit_score: 573
  • Evalue 9.00e-161

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGAAAAAGAGACCGAAGATTCGTCGCACGATTATAAGGGAAATCCGTCGGCTGACATTCGCGAGCTGGTGATCCCCGACGCCGAGGGCGGGCAACGCCTGGATCAGGCCCTGTCCCGGCTGTTGCCCGAGTTTTCGCGCAACCGCATCCAGAACTGGATTCGCGCCCGAAAAATCGCCGTGGATGACGTTTTTCCAAGCACCAAGATGAAGGTCTGCGGCGGCGAGAGCGTGCGGGTCGAAGTCGAGGCCGACCCCAACGCCACCCCCGATGCGCCGGAAGCCATCCCGCTCGACGTGGTGTTCGAAGATCCGATGTTGATGGTGATCAACAAGCCCGCCGGACTGGTGGTGCATCCCGGCAGCGGCAACCGCCAGGGCACCATGCTGAACGCCTTGCTGCACTGGGTGCCGCAAGTGGCCGAGCTGCCGCGCGCGGGCATTGTTCACCGGCTGGACAAGGATACGTCCGGCCTGCTGGTGGTCGCCAAAACGCTGAGAGCCCACACCGATCTGGTGCGGCAGTTGCAGGCGCGCACGGTCAAGCGCGAATACCTCGCCCTGGTCTACGGCGAGATCGATCGATCGGGCACCGTCAATGCGCCCCTGGCGCGCGACCCGCACAACCGCGTCAAGCGCACCGTGCACAGCATGGGCAAGGAAGCGATCACCCATTACGACGTGGTCGAGCGCTTTCCCGGCATCACGCTGGTGCGCTGCAAGCTGGAAACCGGCCGCACCCACCAGATACGGGTGCATATGCAGCACATCGGGCACCCGCTGGTCGGCGAAGACACCTATAACGCAAGCCGCCGCAGCCACCTGAAGCTCCCGTTTCCGCGGCAGGCGCTGCACGCCGAACGCCTGGGTCTGATCCATCCGGTCACGCAGGAATTCATGCAGTGGGAATGTCCCTTGCCGCCCGACTTCGCCGAAATTCTCGGCGCGCTTCGCGCAAATGCCATCTAG
PROTEIN sequence
Length: 323
MEKETEDSSHDYKGNPSADIRELVIPDAEGGQRLDQALSRLLPEFSRNRIQNWIRARKIAVDDVFPSTKMKVCGGESVRVEVEADPNATPDAPEAIPLDVVFEDPMLMVINKPAGLVVHPGSGNRQGTMLNALLHWVPQVAELPRAGIVHRLDKDTSGLLVVAKTLRAHTDLVRQLQARTVKREYLALVYGEIDRSGTVNAPLARDPHNRVKRTVHSMGKEAITHYDVVERFPGITLVRCKLETGRTHQIRVHMQHIGHPLVGEDTYNASRRSHLKLPFPRQALHAERLGLIHPVTQEFMQWECPLPPDFAEILGALRANAI*