ggKbase home page

RTP_02272018_0_2um_scaffold_864_5

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(3080..4378)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 432.0
  • Bit_score: 713
  • Evalue 2.70e-203
23S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003787200 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 432.0
  • Bit_score: 746
  • Evalue 1.40e-212
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 431.0
  • Bit_score: 750
  • Evalue 1.30e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
GTGAATCCCATCGTCGACATTCTCTCCCTCGACCACGAGGGCCATGGCATCGCGCGCATCGACGGCAAGGTCGTCTTCGTCGACGATGCGCTGGCAGGCGAGCGTGCTGAAATCGCGGTGTATCGCAGGCACGCCAAATACGACTCCGCCAACGCGGTTTCCATCCTCAAATCCAGTGCGCAACGTGCCACGCCGCGCTGCCAGTATTTTGGCCGTTGCGGCGGCTGCTCGATGCAGCATCTGGAAGCCAGCGCGCAGGTCGCCGCCAAACAGCGCGTCCTCGAGGAAAACCTCGCCCGCATCGGCAAGGTCAGCCCCGAGGTCGTGATGCGCGCCCTGCACGGCCCCAGCTGGGGTTACCGGTCCCGCGCGCGGCTGTCGTCGCGGCTGGTCGACAAGAAAGGCGGCGTGCTGGTCGGTTTCCGCGAAAAGCGTTCCAGCTTCATCGTCGACATGGCGAGCTGCGAAATCCTCACCCCCGACGTATCGGCATTGATCCAGCCGCTGCGCGAACTCATCGTGCAATTGTCGAATGCTGCCCGCATCCCGCAAGTCGAAGTGGCCGTGGGCGAGCACATCACCGTGCTGGTGTTCCGTTTGCTCGAACCGTGGTCGGACGACGATGAAGCCCGTGTGCGCAGCTTTGCCGACCAGTACCGTGTGCAGGTTTGGGAACAGAAAAAAGGCCCCGACACCGTACGGCCCTTCTGGCCCGACATCGCGCCCGAACTCAGCTACAGCCTGCCTGAGTTCGGCCTCACTATGCCGTTCAAGCCCATCGATTTCACCCAGGTCAATGTCGCGATGAATCGTGCCCTGGTCAGCCGTGCAATGCGGCTGCTTGCCCCGCAGCCGGGTGAACGCATCGCCGATTTGTTTTGTGGACTGGGCAATTTTTCCCTGCCCATCGCAACTTATGGCGCCGAGGTGCTGGGGATCGAGGGCAGTCCGGAACTGGTGGCCCGCGCGCGTGAAAACGCGCTCCACAACAAGCTGCCCAACGCCCACTTCGTGGTCGACAACCTGTTCGAGATGACGCCGGAAAAGTTTGCCACTCTCGGGCAAATCGATAAATTGCTGATCGATCCACCCCGCAGCGGCGCGCTCGAAGTGGTCAAGTCCCTGCCGGACAGCGGCGCACCGCATCGCATCGTTTACGTCTCCTGCGACGCCGCCACCCTGGCGCGCGACGCCGGCGAACTTTGTCACAACAAAGGCTACCGACTCGCAGCGGCAGGCGTCGCCAACATGTTCCCGCACACCGCGCATGTCGAGTCGATTGCGCTGTTCGAGCGATAA
PROTEIN sequence
Length: 433
VNPIVDILSLDHEGHGIARIDGKVVFVDDALAGERAEIAVYRRHAKYDSANAVSILKSSAQRATPRCQYFGRCGGCSMQHLEASAQVAAKQRVLEENLARIGKVSPEVVMRALHGPSWGYRSRARLSSRLVDKKGGVLVGFREKRSSFIVDMASCEILTPDVSALIQPLRELIVQLSNAARIPQVEVAVGEHITVLVFRLLEPWSDDDEARVRSFADQYRVQVWEQKKGPDTVRPFWPDIAPELSYSLPEFGLTMPFKPIDFTQVNVAMNRALVSRAMRLLAPQPGERIADLFCGLGNFSLPIATYGAEVLGIEGSPELVARARENALHNKLPNAHFVVDNLFEMTPEKFATLGQIDKLLIDPPRSGALEVVKSLPDSGAPHRIVYVSCDAATLARDAGELCHNKGYRLAAAGVANMFPHTAHVESIALFER*