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RTP_02272018_0_2um_scaffold_502_25

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(24037..26367)

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV secretory pathway VirD4 components n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI88_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 784.0
  • Bit_score: 988
  • Evalue 3.70e-285
type IV secretory pathway VirD4 components similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 784.0
  • Bit_score: 988
  • Evalue 1.00e-285
Putative type IV secretory pathway VirD4 components {ECO:0000313|EMBL:AAZ97640.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 784.0
  • Bit_score: 988
  • Evalue 5.10e-285

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2331
ATGGCGCACCAACCCCAGACCGCCGCTATCAGGACGAGCAACCAGCCCCAGGGCGCTGATCGCTGGGGCGCGCCTCTATTCCTGGGCGGTATGGCGGGCCTACTGGTGGCAGCAGGCGTTTATCTGGGCGGGTGGGGGATGGTATGGCAGTCCCAAGGCAGGGGCTTCCAGGCTGTCCCGGCGCTGCATCATCTTCTCCCCGGACGGCAGGGTGGAGATCGGCCACACGAAAAAGCAGTGGCCTTCATGCAGGCCCGTTACCCCACCATTCTTAAAACCCTCGAAATCGCCCCGCAGGCGCTGGGCCTGCTGGCTGGTGGGCTGGTTTTCTGGATGACGATGGGTGATGTGGTTGTGGCCACGCAGGACCGACATATCCGCGGCCGCCGCCGTCTCCAGGGCGATGCTGCAATTAAGTCCTGGGTGTTAGCAGAAGGTGAGGATGCGGACGGCCTGAAATTGCACCCGGACCTTCCCCCCATGTCACTGTCGCGTGAAACTCGCCACTTTTTGATTTTCGGGGGGACCGGAACCGGCAAAACGCAGACCATTCTCCCATTGATGCGGGCCGCCAGAGAGCGGGGCGACCGGATGGTTATATTCGACATGAAGGGCGATTTCGCCCGCGAATTTCCGTCTTGCACCAAGACTTACAACAACAAGCAGGTCGAGGCAGTGGATGCGATTTTTGCACCCTGGGACAGCCGCTCCATGCCATGGGCCGTTGCCCGTGACGTGGACACCTTGGCTGCGGCGCGTGAATTCTCTGCACGCATGATCCCAGAAGCCCAAGGCGGTACCCCCTTCTTTTCAAACGCGGCGCGGCAAGTTTTGATTGCGAGCTTGGTGGAATTGCAATCTGAAAGTCAGGAGAAATGGGGCTTCGCTGAGCTCGCAAAAAAACTGACCCGCCCCATCGAGGAGCTTGCCGAGGCCGCGCGGGTTCATTTCCCGGAGGCCCTTAAAGCCCTGTCGGACGGGCAGCAAAACATCACCAGTGCGGGCGTGCTGGGCAATATGATGAGTTACCTGTCCGTTATTTTTGACCTGGCGCGGGCGTGGCCAGAGCCTGGGATTTTCAGCATCCGGGACTGGCTGCTGGAAAAAAACAAGGCCACCAAATCGGTGATCCTACAGAGCAACGGCCAATTTGAATCCCTCGCACGTGCCTTTAATAGCACGATCATCAGTCTTGTAAGCCAGCTTATCAAATCCGATTTAATTAAAGAGTCAACGGAAAGAAGGTTGTGGTTCTTCCTGGACGAGTTTCCTGAGCTCGGCAAGGTTGAGCCGATTTTTTCGCTGGCGGCGGTCGGCAGGAGTAAGGGGATCCGCGTGGTGATCGGCCTGCAAGATCTCGCGCAGAGCAAGAAAATCTACGGCGCGGAACTGACTGAATCATTGCTCAGCATGGTCGGAACCCACATTGTGACGCGGGTGTCGGCCGGCGAAACGGCACACTTCATCACCGAAAAACTCATCGACGAGCGTGAGATTGAAAGGCTGGACGTAAGCACGTCCAGCGGCACGGGTCGCACCCCCGGCCTCTTCACCCCAGGCGGCACCAGGACCTCAAGCTGGAAACCCGTGCGCGAGCCGGTGATGCTGCCTTCCGAGTTGCAGCAGCTTGGACCCGTTCCCGGCCAAGGCGTCAAAGTATTGCTGCTGGGCATTTGTGAGGACGTGCTTGAGGTCTTAATTCCATTTTCCACGCCACACAAATTCCGCCCCGACAGCGCGATCGCCGACTGGACGGGATACCCCCGCCGGCCGGTTGCTGTCCCCGAGCAAGAAACGCTTCAGCCTAAGCCTCGGCCCGTGCCTTCATGGGCCGAGGAGGAGGCAGCAGAGGTGCCAGCCGCACCGGCACCGGAATCCGCTGCCGTCGACAGACAGGAAGACATTGACGGCGACGAGGCCGGTGAAGAAGGCGAAGAAGCAGCCCCCACCCCGGAGGGCACGAGCGCCAACTCCGATCCGCTGTCTTTCCTGGACGATGGCGAGTCATCAGAAAAAACGCCGCCGCCGCAAATCGAGACCCGGATGCTGCCCGTTTCCTCCCCACTGGCCGCCCAACTGACCGACCAGGCCAAGGAAGAAGCAGCCGAGAGCCTCGGCAGCGAGCTCGCCACCCATGCCGGCATCGCGGCGTTGCCCACCGGGCTGAGCGAGATCGCGCACGTCGTCGAAATCATTGACCTAGTCGCAGCCGTGGCTCTGCCACAAACAGACGTGCTGCCCACATCTGTCATGGGAGAGCAGCAGCCCCCCAAGAAAAGAAAATTCCGCCTGAAAAAGGCCGCAGCGCCGCAGCTTGAGGAGAGTATTTAA
PROTEIN sequence
Length: 777
MAHQPQTAAIRTSNQPQGADRWGAPLFLGGMAGLLVAAGVYLGGWGMVWQSQGRGFQAVPALHHLLPGRQGGDRPHEKAVAFMQARYPTILKTLEIAPQALGLLAGGLVFWMTMGDVVVATQDRHIRGRRRLQGDAAIKSWVLAEGEDADGLKLHPDLPPMSLSRETRHFLIFGGTGTGKTQTILPLMRAARERGDRMVIFDMKGDFAREFPSCTKTYNNKQVEAVDAIFAPWDSRSMPWAVARDVDTLAAAREFSARMIPEAQGGTPFFSNAARQVLIASLVELQSESQEKWGFAELAKKLTRPIEELAEAARVHFPEALKALSDGQQNITSAGVLGNMMSYLSVIFDLARAWPEPGIFSIRDWLLEKNKATKSVILQSNGQFESLARAFNSTIISLVSQLIKSDLIKESTERRLWFFLDEFPELGKVEPIFSLAAVGRSKGIRVVIGLQDLAQSKKIYGAELTESLLSMVGTHIVTRVSAGETAHFITEKLIDEREIERLDVSTSSGTGRTPGLFTPGGTRTSSWKPVREPVMLPSELQQLGPVPGQGVKVLLLGICEDVLEVLIPFSTPHKFRPDSAIADWTGYPRRPVAVPEQETLQPKPRPVPSWAEEEAAEVPAAPAPESAAVDRQEDIDGDEAGEEGEEAAPTPEGTSANSDPLSFLDDGESSEKTPPPQIETRMLPVSSPLAAQLTDQAKEEAAESLGSELATHAGIAALPTGLSEIAHVVEIIDLVAAVALPQTDVLPTSVMGEQQPPKKRKFRLKKAAAPQLEESI*