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RTP_03222018_0_1um_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_84_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309..542
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034D2D09
FmdB family regulatory protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

729..1139
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QAZ2_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1136..2854
DNA (1719bp) protein (573aa)
AAA family ATPase n=1 Tax=mine drainage metagenome RepID=T1DCW2_9ZZZZ
ATPase central domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2875..3168
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C5I1_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3165..3332
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5E2D8_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3380..3688
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002E43472
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3698..4012
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BK73_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4047..5633
DNA (1587bp) protein (529aa)
Amine oxidase n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5E2E3_9GAMM
amine oxidase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5638..6252
DNA (615bp) protein (205aa)
gstB; glutathione S-transferase (EC:2.5.1.18)
glutathione S-transferase n=1 Tax=Methylococcus capsulatus RepID=UPI0002F18969
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6252..7796
DNA (1545bp) protein (515aa)
UPF0061 protein MCA0585 n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Y585_METCA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7807..8070
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002D45390
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8802
DNA (687bp) protein (229aa)
Putative fumarylacetoacetate (FAA) hydrolase family n=1 Tax=mine drainage metagenome RepID=E6QAZ3_9ZZZZ
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:GAO35447.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
fumarylacetoacetate (FAA) hydrolase
RTP_03222018_0_1um_scaffold_84_13
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8882..9130
DNA (249bp) protein (83aa)
BolA-like protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FFC6_9ALTE
bolA-like protein
BolA-like protein {ECO:0000313|EMBL:AFP30887.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
RTP_03222018_0_1um_scaffold_84_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9150..9596
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QT84_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9662..9976
DNA (315bp) protein (105aa)
Rieske 2Fe-2S family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60B94_METCA
Rieske 2Fe-2S family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9997..10875
DNA (879bp) protein (293aa)
tRNA nucleotidyltransferase n=1 Tax=Methylococcus capsulatus RepID=UPI000304B259
tRNA nucleotidyltransferase/poly(A) polymerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10883..11272
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CIQ5_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11305..11775
DNA (471bp) protein (157aa)
Ankyrin n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPY8_SIDLE
Ankyrin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_19
unknown

Not on your lists

11772..11903
DNA (132bp) protein (44aa)

This feature has no annotations

RTP_03222018_0_1um_scaffold_84_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11913..12224
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DJ17_9GAMM
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_21
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12314..13579
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNJ4_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02229.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
RTP_03222018_0_1um_scaffold_84_22
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13976..15754
DNA (1779bp) protein (593aa)
Retron-type RNA-directed DNA polymerase (EC:2.7.7.49)
Ribonuclease H n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E2D5_9GAMM
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_03222018_0_1um_scaffold_84_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15925..16401
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKY0_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16569..17036
DNA (468bp) protein (156aa)
DNA-binding protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRB1_THISH
DNA-binding protein {ECO:0000313|EMBL:CDQ09128.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
DNA-binding protein
RTP_03222018_0_1um_scaffold_84_25
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17033..17149
DNA (117bp) protein (39aa)
Mobile mystery protein B n=1 Tax=mine drainage metagenome RepID=E6Q3L9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ09127.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
hypothetical protein
RTP_03222018_0_1um_scaffold_84_26
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17198..17620
DNA (423bp) protein (141aa)
Mobile mystery protein B n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRB0_THISH
mobile protein B
Mobile mystery protein B {ECO:0000313|EMBL:ACL74364.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_03222018_0_1um_scaffold_84_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17735..18118)
DNA (384bp) protein (128aa)
superoxide dismutase, Fe (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK26_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_84_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18151..18366)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036436BA
rubredoxin
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_84_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18363..18755)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374C01D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_84_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18752..19927)
DNA (1176bp) protein (392aa)
Putative acyl-CoA dehydrogenase id=1340117 bin=GWE1_T_denit_62_9 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
acyl-CoA dehydrogenase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 136 in total

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