name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_1um_scaffold_115_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
249..1232
|
Integron integrase Phage integrase Phage integrase N-terminal SAM-like domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820I6_NITEU
intINeu; integron integrase
Integron integrase Phage integrase Phage integrase N-terminal SAM-like domain {ECO:0000313|EMBL:CAD86100.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
|
|
RTP_03222018_0_1um_scaffold_115_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1232..1702
|
tRNA-adenosine deaminase (EC:3.5.4.-)
CRISPR-associated protein Csn1 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E76EF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1699..2193
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003635963
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2473..2775)
|
tRNA/rRNA methyltransferase SpoU n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9W0_9PROT
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:BAN34795.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_03222018_0_1um_scaffold_115_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2775..3128)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BCF46
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3128..3901)
|
hypothetical protein id=12495559 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3921..4745)
|
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] id=12495560 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4809..6035)
|
succinyldiaminopimelate transaminase (EC:2.6.1.11); K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] id=12495561 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinyldiaminopimelate transaminase (EC:2.6.1.11)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6047..6949
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363BA38
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6942..7319
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376C7DF
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7235..9274)
|
diguanylate cyclase n=1 Tax=Janthinobacterium lividum RepID=UPI000289AC7E
Diguanylate cyclase {ECO:0000313|EMBL:KIF82410.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
diguanylate cyclase domain protein
|
|
RTP_03222018_0_1um_scaffold_115_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9471..10736)
|
sugar kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003616A39
FGGY family sugar kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10741..11160)
|
7-cyano-7-deazaguanine reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D462A
7-cyano-7-deazaguanine reductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11246..14743
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA624
condensin subunit Smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_115_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14833..15078
|
Antitoxin of a toxin/antitoxin system protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRG7_9GAMM
Prevent-host-death protein Phd/YefM
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
|
|
RTP_03222018_0_1um_scaffold_115_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15075..15461
|
PilT protein domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRG8_9GAMM
pilT; Pilus retraction motor protein PilT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
|
|
RTP_03222018_0_1um_scaffold_115_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15586..16869
|
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=12495574 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
seryl-tRNA synthetase (EC:6.1.1.11)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16908..18353)
|
murein transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CFA78
extracellular solute-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_trna_1
unknown
|
Not on your lists |
18384..18470
|
transferRNA Ser
|
|
RTP_03222018_0_1um_scaffold_115_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18655..19857)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIV4_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_20
unknown
|
Not on your lists |
20028..20279
|
This feature has no annotations |
|
RTP_03222018_0_1um_scaffold_115_21
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20331..21581
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIV8_THIDA
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21594..21821)
|
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
RTP_03222018_0_1um_scaffold_115_23
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21861..22217)
|
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHB1_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01362.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
|
|
RTP_03222018_0_1um_scaffold_115_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22421..23002)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003821AC0
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22999..23910)
|
ErfK/YbiS/YcfS/YnhG family protein id=12493150 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_115_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23979..24692)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003821302
Uncharacterized protein {ECO:0000313|EMBL:GAO36842.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
N-formylglutamate amidohydrolase
|
|
RTP_03222018_0_1um_scaffold_115_27
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24699..25934)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380201D
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAO36841.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
|
|
RTP_03222018_0_1um_scaffold_115_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25931..27403)
|
glutathione synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FE5BB
glutathione synthase/ribosomal protein S6 modification protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_115_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27400..28134)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382A6BB
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|