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RTP_03222018_0_1um_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_307_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=1316221 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326..1528)
DNA (1203bp) protein (401aa)
Glycosyl transferases group 1 id=1316220 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
group 1 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1532..2590)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein id=1316219 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2620..3462)
DNA (843bp) protein (281aa)
Polysaccharide deacetylase id=1316218 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
polysaccharide deacetylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3463..4611)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Thiobacillus denitrificans RepID=UPI000373D4D9
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..5645)
DNA (1035bp) protein (345aa)
ATPase n=1 Tax=Thiobacillus thioparus RepID=UPI000381E924
ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5726..7318)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003640E99
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_307_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7290..8231)
DNA (942bp) protein (314aa)
protein-tyrosine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003650052
protein-tyrosine kinase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8240..9775)
DNA (1536bp) protein (512aa)
Polysaccharide chain length determinant protein id=1316213 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
polysaccharide chain length determinant protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10456)
DNA (624bp) protein (208aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B8071
polysaccharide export outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10676..11065
DNA (390bp) protein (130aa)
nucleotide pyrophosphohydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003670EF6
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_307_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11058..11375
DNA (318bp) protein (106aa)
ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7A1A
ferredoxin 2fe-2s protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_307_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11386..11988
DNA (603bp) protein (201aa)
Putative uncharacterized protein id=1316209 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11982..12887
DNA (906bp) protein (302aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003813636
ABC-2 type transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12880..13665
DNA (786bp) protein (262aa)
ABC-2 type transporter, NodJ; K09694 lipooligosaccharide transport system permease protein id=12494176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-2 type transporter, NodJ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_307_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13826..14794
DNA (969bp) protein (323aa)
Putative uncharacterized protein id=1316206 bin=GWE1_T_denit_62_9 species=Mycobacterium fortuitum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DNA polymerase III
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14797..15723)
DNA (927bp) protein (309aa)
lipoyl synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D89
lipoyl synthase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15762..16316
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AF101
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_307_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16309..16854
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003782B8A
thioredoxin family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16855..17163)
DNA (309bp) protein (103aa)
dioxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE749
dioxygenase ferredoxin subunit
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17165..18280)
DNA (1116bp) protein (372aa)
anthranilate phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000361F7BF
anthranilate phosphoribosyltransferase-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_307_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18330..18953)
DNA (624bp) protein (208aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=12494172 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipoate-protein ligase B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_307_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18982..19260)
DNA (279bp) protein (93aa)
UPF0250 protein Tbd_0268 id=1362416 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19265..20053)
DNA (789bp) protein (263aa)
D-alanine transminase (EC:2.6.1.21)
cytochrome C550 n=1 Tax=Thiobacillus denitrificans RepID=UPI000382CF4D
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20050..21165)
DNA (1116bp) protein (372aa)
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036336E8
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21162..22007)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003687C9B
rare lipoprotein A
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22025..23125)
DNA (1101bp) protein (367aa)
cell wall shape-determining protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E4145
rod shape-determining protein RodA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_307_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23112..24956)
DNA (1845bp) protein (615aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein 2 n=1 Tax=Thiobacillus thioparus RepID=UPI000368587B
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24953..25453)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037275D8
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_307_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25450..26340)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003734A71
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying items 1-30 of 112 in total

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