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RTP_03222018_0_1um_scaffold_687

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_687_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1627)
DNA (1626bp) protein (542aa)
Putative tetrathionate reductase, subunit A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI39_THIDA
tetrathionate reductase subunit A
Putative tetrathionate reductase, subunit A {ECO:0000313|EMBL:AAZ97694.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1624..2205)
DNA (582bp) protein (194aa)
Putative tetrathionate reductase, subunit A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI39_THIDA
tetrathionate reductase subunit A
Putative tetrathionate reductase, subunit A {ECO:0000313|EMBL:AAZ97694.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2216..3301)
DNA (1086bp) protein (362aa)
Putative tetrathionate reductase subunit C n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI40_THIDA
tetrathionate reductase subunit C
Putative tetrathionate reductase subunit C {ECO:0000313|EMBL:AAZ97693.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3304..4044)
DNA (741bp) protein (247aa)
Putative tetrathionate reductase subunit B n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI41_THIDA
tetrathionate reductase subunit B
Putative tetrathionate reductase subunit B {ECO:0000313|EMBL:AAZ97692.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4285..5004)
DNA (720bp) protein (240aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF70_THIDA
periplasmic sensor signal transduction histidine kinase
RTP_03222018_0_1um_scaffold_687_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5274..5399
DNA (126bp) protein (42aa)
ISAfe7, transposase orfA (Fragment) n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XWX5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH47035.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
ISAfe7, transposase orfA
RTP_03222018_0_1um_scaffold_687_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5552..5791)
DNA (240bp) protein (80aa)
Two Component Transcriptional Regulator, LuxR family id=1348377 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LuxR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5730..5969)
DNA (240bp) protein (80aa)
Two Component Transcriptional Regulator, LuxR family id=1348377 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LuxR family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5999..6763)
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003813AB6
short chain dehydrogenase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6804..7442)
DNA (639bp) protein (213aa)
Thiol:disulfide interchange protein DsbA id=1348379 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
thiol:disulfide interchange protein DsbA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..8005)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DD89D
FtsN cell division protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8008..9681)
DNA (1674bp) protein (558aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FA722
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..11920)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375E7C1
replication restart DNA helicase PriA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_687_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12264..13106)
DNA (843bp) protein (281aa)
import inner membrane translocase subunit Tim44 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E5B5B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_687_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13172..14245)
DNA (1074bp) protein (358aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase id=1343549 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14326..14733)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003686672
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98731.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_17
unknown

Not on your lists

comp(15309..15470)
DNA (162bp) protein (54aa)

This feature has no annotations

RTP_03222018_0_1um_scaffold_687_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15934..17088
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA3C6
transporter protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17181..17522)
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=1343553 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17595..18086)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C1A3F
transport-associated
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18138..18434)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C1A3F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98727.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_687_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18484..18783)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C1A3F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_687_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19084..19251)
DNA (168bp) protein (56aa)
UPF0391 membrane protein Tbd_2772 id=1343555 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19413..20768)
DNA (1356bp) protein (452aa)
Two Component Transcriptional Regulator, Fis family id=1343556 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Fis family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20765..21283)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003633130
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21232..22671)
DNA (1440bp) protein (480aa)
signal transduction histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366F092
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_687_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22750..24156)
DNA (1407bp) protein (469aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
glutamate synthase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00035FEFC7
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_687_28
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24250..24423)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E81E71
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:AFZ61020.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
RTP_03222018_0_1um_scaffold_687_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24395..28990)
DNA (4596bp) protein (1532aa)
Glutamate synthase large subunit {ECO:0000313|EMBL:AAZ98720.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AAZ98720.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
glutamate synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00037776CE
RTP_03222018_0_1um_scaffold_687_30
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29468..29947)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D3E8D
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ACK78077.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
Displaying items 1-30 of 129 in total

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