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RTP_03222018_0_1um_scaffold_798

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_798_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

471..716
DNA (246bp) protein (82aa)
Prevent-host-death family protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLI8_9BACT
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBE67854.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
RTP_03222018_0_1um_scaffold_798_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

713..1102
DNA (390bp) protein (130aa)
PilT-like protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLI7_9BACT
PilT-like protein
PilT-like protein {ECO:0000313|EMBL:CBE67853.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
RTP_03222018_0_1um_scaffold_798_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1106..2734)
DNA (1629bp) protein (543aa)
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003728723
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2738..3706)
DNA (969bp) protein (323aa)
acetyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003614A5F
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_798_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3994..7377
DNA (3384bp) protein (1128aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000382518E
Uncharacterized protein {ECO:0000313|EMBL:GAO34886.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_03222018_0_1um_scaffold_798_6
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7443..7802)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YGA5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76794.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
RTP_03222018_0_1um_scaffold_798_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..9204)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382B94D
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..9756)
DNA (552bp) protein (184aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=1302817 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9872..12163)
DNA (2292bp) protein (764aa)
Type IV pilus assembly protein PilQ id=1302818 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type IV pilus assembly protein PilQ
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12195..12692)
DNA (498bp) protein (166aa)
Type IV pilus assembly protein PilP id=1302819 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type IV pilus assembly protein PilP
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12689..13309)
DNA (621bp) protein (207aa)
pilus assembly protein PilO n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0990
type IV pilus assembly membrane transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..13884)
DNA (579bp) protein (193aa)
type IV pilus assembly protein PilN; K02663 type IV pilus assembly protein PilN id=12493055 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type IV pilus assembly protein PilN
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13881..14969)
DNA (1089bp) protein (363aa)
fimbrial assembly protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C95C2
Type IV pilus assembly protein PilM
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15345..17807
DNA (2463bp) protein (821aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] id=12493053 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_798_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17804..18379
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376CCDC
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18453..19475
DNA (1023bp) protein (341aa)
Putative glycosyltransferase id=1302825 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19472..19738
DNA (267bp) protein (89aa)
putative glycosyltransferase id=12495848 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_798_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19759..21840
DNA (2082bp) protein (694aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4E22
periplasmic sensor signal transduction histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21837..23189
DNA (1353bp) protein (451aa)
Two Component Transcriptional Regulator, Fis family id=1302827 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Fis family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23209..25470)
DNA (2262bp) protein (754aa)
Exporter of the RND superfamily id=1346001 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND efflux transporter
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25490..26938)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003701C11
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96586.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_798_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26935..27765)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362313F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96587.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_798_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27887..30679
DNA (2793bp) protein (931aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3651
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30687..33494
DNA (2808bp) protein (936aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C88E2
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_798_25
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33850..34704)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037586FA
PEP-CTERM motif-containing protein {ECO:0000313|EMBL:KFC66135.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
RTP_03222018_0_1um_scaffold_798_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35061..36137)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADY2_9PROT
Molybdopterin biosynthesis protein MoeY {ECO:0000313|EMBL:GAO34908.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_03222018_0_1um_scaffold_798_27

Not on your lists

comp(36174..37046)
DNA (873bp) protein (291aa)
ThiF/MoeB/HesA family E1-like protein n=1 Tax=uncultured bacterium CSL132 RepID=G4WVJ8_9BACT
ThiF/MoeB/HesA family E1-like protein {ECO:0000313|EMBL:AEQ20450.1}; TaxID=1091568 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL132.;"
moeB; hypothetical protein
RTP_03222018_0_1um_scaffold_798_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37043..37831)
DNA (789bp) protein (263aa)
Uncharacterized protein id=1302834 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_798_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37961..38965)
DNA (1005bp) protein (335aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Thiobacillus denitrificans RepID=UPI000369DC86
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_798_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39186..39866)
DNA (681bp) protein (227aa)
GTP-binding protein YsxC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037287B6
cell division checkpoint GTPase YihA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 31 in total

View Taxonomy