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RTP_03222018_0_1um_scaffold_804

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_804_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284..640
DNA (357bp) protein (119aa)
Competence protein ComEA id=1343840 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

890..1669
DNA (780bp) protein (260aa)
zinc/iron permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000363172F
ZIP Zinc transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1601..1819)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF555
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1844..3175
DNA (1332bp) protein (444aa)
ribosomal protein S12 methylthiotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000378CAD4
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3207..4205)
DNA (999bp) protein (333aa)
Putative uncharacterized protein id=1343844 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4236..4730
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=1343845 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4720..5961
DNA (1242bp) protein (414aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family id=1343846 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
LolC/E family lipoprotein releasing system, transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..6634
DNA (681bp) protein (227aa)
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000374397D
lipoprotein releasing system, ATP-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6647..8983
DNA (2337bp) protein (779aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_804_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9084..11240
DNA (2157bp) protein (719aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E3965
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_804_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11240..11647
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371F5F9
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_804_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11644..12693)
DNA (1050bp) protein (350aa)
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA849
tRNA 2-selenouridine synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12971..13144)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EC63F
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13266..13715)
DNA (450bp) protein (150aa)
SsrA-binding protein id=1320289 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
smpB; SsrA-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13766..14200
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=1320290 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14197..14535
DNA (339bp) protein (113aa)
RnfH n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D819A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14602..14952)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C77F7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_804_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15180..16640
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000367F9EC
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16743..18305
DNA (1563bp) protein (521aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003702E01
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_804_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18313..19539
DNA (1227bp) protein (409aa)
putative transmembrane protein; K07007 id=12494573 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_804_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19556..21178
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363229A
FAD-dependent dehydrogenase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 21 items

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