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RTP_03222018_0_1um_scaffold_2087

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_2087_1
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(178..693)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A7T7_COLFT
yhaV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK59848.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
RTP_03222018_0_1um_scaffold_2087_2

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comp(690..1019)
DNA (330bp) protein (110aa)
HtrA suppressor protein n=4 Tax=root RepID=B7J9L1_ACIF2
regulator PrlF
Putative regulator {ECO:0000313|EMBL:CBI04255.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RTP_03222018_0_1um_scaffold_2087_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1415..2281
DNA (867bp) protein (289aa)
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000255|HAMAP-Rule:MF_01428}; Short=Glu-Q-RSs {ECO:0000255|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000255|HAMAP-Rule:MF_01428};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=GLUQ_THIDA
RTP_03222018_0_1um_scaffold_2087_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2346..2900
DNA (555bp) protein (185aa)
Putative uncharacterized protein id=1354785 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_2087_trna_1
unknown

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2999..3072
DNA (74bp)
transferRNA Met
RTP_03222018_0_1um_scaffold_2087_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3158..4498
DNA (1341bp) protein (447aa)
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=12498675 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tRNA-i(6)A37 thiotransferase enzyme MiaB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_2087_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4495..5457
DNA (963bp) protein (321aa)
PhoH-like protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFF2_THIDA
PhoH-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_2087_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5444..5905
DNA (462bp) protein (154aa)
hypothetical protein; K07042 probable rRNA maturation factor id=12498678 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_2087_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5917..6795
DNA (879bp) protein (293aa)
Putative uncharacterized protein id=1335131 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_2087_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6799..7944)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037612EA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_2087_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8001..8741
DNA (741bp) protein (247aa)
pteridine reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000378B8F2
pteridine reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_2087_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8816..9991
DNA (1176bp) protein (392aa)
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FE6
putative methyltransferase, Methylase of polypeptide chain release factors
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_2087_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10031..11209
DNA (1179bp) protein (393aa)
S-adenosylmethionine synthase id=12498683 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
S-adenosylmethionine synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 13 items

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