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RTP_03222018_0_1um_scaffold_166_14

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 13483..14379

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12495473 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 294.0
  • Bit_score: 476
  • Evalue 1.80e-131
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 298.0
  • Bit_score: 444
  • Evalue 1.60e-122
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 298.0
  • Bit_score: 444
  • Evalue 8.10e-122

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
GTGAAGCCCGCGCGACAATCCATCGATGGCGTGCTGTTACTGAACAAGCCGGTTGGCATCACCTCCAACGCCGCGCTGCAAAAAGCCAAGTGGTTGCTCAACGCCAAAAAGGCGGGGCATACCGGCACCCTTGATCCCTTCGCCGATGGCTTGCTGCCGCTGTGTTTCGGTGAGGCGACCAAGTTTTCAGCCTACCTGCTCGAAGCCGACAAGCACTATCGTGCGGTCATGCAACTCGGCGTCACCACCACCACCGGCGACCCGGAGGGAGAAATACTCAGCACCTGCGAAGTCAACGTCAGCCGTGACGATATCCTCGCCGTGCTGCCCCGCTTCATGGGCGAAATCGAGCAGATCCCCCCCATGCACTCGGCGCTCAAGCATCAGGGTCGTCCACTGTACGAATACGCCCGTGCCGGCATCGAAATCGAGCGCGCCCCTCGTAAAGTCACGATCCGCGCACTTGAATTGATTGAATGCGCGCCGCCACGTGTGGTGCTCGATGTTCAATCCACGGCTGGCACCTATATCCGCACCCTGGCGCAGGATATCGGCGCAGCGTTGGGTTGCGGCGCCCACCTCACCGCATTAACGCGCACCGCTGCAGGCGGATTCAGCCTGGAGCAGGCCCATACCCTGGACAATCTGGAGGCGCTTGGACCCGGCGAACGTCTAACCTGGCTCCATCCGGCGGATTACCTGGTGGCGCATTTACCTGCCGTGCACCTTGACGAGTCGGATGCCGCTTCCCTCTGCCAGGGTCGCACCCTAGACCATTCGGCCGCCGATTCAGGATTGATGCGTGTGTATACGGCCACCAACCGCTTTCTTGGCCTGGCCAATGCAGACGCCGGCCAACTGGTGCCGCACCGTCTAGTCAACACACAACAAGCTTGA
PROTEIN sequence
Length: 299
VKPARQSIDGVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLEADKHYRAVMQLGVTTTTGDPEGEILSTCEVNVSRDDILAVLPRFMGEIEQIPPMHSALKHQGRPLYEYARAGIEIERAPRKVTIRALELIECAPPRVVLDVQSTAGTYIRTLAQDIGAALGCGAHLTALTRTAAGGFSLEQAHTLDNLEALGPGERLTWLHPADYLVAHLPAVHLDESDAASLCQGRTLDHSAADSGLMRVYTATNRFLGLANADAGQLVPHRLVNTQQA*