name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_1um_scaffold_166_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29..508
|
bacterioferritin; K03594 bacterioferritin id=12497953 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
bacterioferritin
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
667..1395
|
Periplasmic protein TonB id=1317132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic protein TonB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1398..2144
|
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI000372CEAE
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_166_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2144..2572
|
biopolymer transporter ExbD n=1 Tax=Thiobacillus denitrificans RepID=UPI0003653113
biopolymer transport protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2600..4756
|
putative TonB-denpendent receptor; K02014 iron complex outermembrane recepter protein id=12497352 bin=THIO_MID species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative TonB-denpendent receptor
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
|
|
RTP_03222018_0_1um_scaffold_166_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4753..5400
|
Putative uncharacterized protein id=1349958 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_166_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5403..5588
|
4-oxalocrotonate tautomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00037C7292
isomerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5592..7388
|
excinuclease ABC subunit C n=1 Tax=Thiobacillus thioparus RepID=UPI00036779C0
excinuclease ABC subunit C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_166_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7388..7957
|
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003697E51
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_trna_1
unknown
|
Not on your lists |
8007..8079
|
transferRNA Gly
|
|
RTP_03222018_0_1um_scaffold_166_trna_2
unknown
|
Not on your lists |
8152..8222
|
transferRNA Cys
|
|
RTP_03222018_0_1um_scaffold_166_trna_3
unknown
|
Not on your lists |
8414..8497
|
transferRNA Leu
|
|
RTP_03222018_0_1um_scaffold_166_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8559..8987
|
ribosome maturation protein RimP n=1 Tax=Thiobacillus thioparus RepID=UPI000374747A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9007..10485
|
peptidase M54 n=1 Tax=Thiobacillus denitrificans RepID=UPI000378F4D3
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_166_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10503..13112
|
translation initiation factor IF-2 n=1 Tax=Thiobacillus thioparus RepID=UPI000364F979
infB; translation initiation factor IF-2
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_166_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13112..13486
|
ribosome-binding factor A n=1 Tax=Thiobacillus thioparus RepID=UPI000372DC32
ribosome-binding factor A
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_166_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13483..14379
|
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12495473 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_166_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14469..14738
|
30S ribosomal protein S15 id=1324183 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
30S ribosomal protein S15
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_166_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14896..17043
|
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
polynucleotide phosphorylase/polyadenylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D5EBA
polynucleotide phosphorylase
|
|
RTP_03222018_0_1um_scaffold_166_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17098..18480)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037464E3
two component transcriptional regulator, sensor histidine kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18483..19151)
|
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037576C5
putative response regulator, CheY family
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_166_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19646..20089)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A018F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96645.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_166_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20171..20590)
|
RNA polymerase-binding transcription factor DksA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKX7_THIDA
TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_166_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20681..21439
|
HAD-superfamily hydrolase subfamily IA, variant 3 id=1324188 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
HAD family hydrolase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_166_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21473..22327)
|
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
methenyltetrahydrofolate cyclohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003648A7F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_166_trna_4
unknown
|
Not on your lists |
22463..22543
|
transferRNA Pro
|
|
RTP_03222018_0_1um_scaffold_166_trna_5
unknown
|
Not on your lists |
22570..22643
|
transferRNA Arg
|
|
RTP_03222018_0_1um_scaffold_166_trna_6
unknown
|
Not on your lists |
22684..22756
|
transferRNA His
|
|
RTP_03222018_0_1um_scaffold_166_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23133..31763
|
hypothetical protein id=15194138 bin=GWC2_NOV_55_46 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
|
|
RTP_03222018_0_1um_scaffold_166_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32048..32344
|
Uncharacterized protein id=1312412 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|