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RTP_03222018_0_1um_scaffold_398_19

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 21576..22919

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family id=12498611 bin=THIO_MID species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 448.0
  • Bit_score: 513
  • Evalue 2.00e-142
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 446.0
  • Bit_score: 394
  • Evalue 2.90e-107
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEG31196.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 446.0
  • Bit_score: 394
  • Evalue 1.40e-106

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Taxonomy

Thioalkalimicrobium cyclicum → Thioalkalimicrobium → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGACGCCGACCCTCCTGATCGCCGAAGACGATGCCGCCCTGGCCAAGCTGGCGGCGCGTGTCGCCGAGGAAACCGGATTTGACGTCGTCGTCCGCCACGACGGCAATGCCGCCCGAGACCTGCTGGAAACCGAGGCGCCCGATGCCCTGCTCACCGACCTGCGCCTGCCGGGGTGCGACGGACTCGATCTGCTGCGGGTCTCGAAAACACTCGATCCGCAGCGTCCGGTGCTGCTGATGACCGGCTACGCCACCCCGATGAACGCAATCGAGGCCTTTCGTCTGGGCGTGTCAGACATCCTGCTCAAGCCCTTCGATCTGGATGTGGCACGGGCCGCGCTGGTTCGGCTCAAAGCCGCGTTCGACCAGAAAGCGCGCCTGCGGCAACTCACCGAACAGGTCGCCCGCAGCCAAGGCACGGCCTACCTATCTGCGCAGTCCGCGGCGATGCAGGGCACGCTGGAGCTCGCCGCGCAGGTCGCCGGCAGCCTCCTGCCGGTGCTGCTCGAAGGCGAAACCGGCGTCGGCAAGGGCGTGCTGGCGCGGCATATCCACGCGCTGTCGCCGCGTGCCGGCGGGCCGTTCTTCACGCTCCACTGCGGCGCGCTGCCGCAAACCCTGCTGGAATCGGAATTGTTCGGTTATGAAAAAGGCGCGTTCTCCGGCGCCACCGCGAGAAAGCCGGGCCTGCTGGAACTGGCCGCCGGCGGCACGCTGTTTCTCGACGAGATCAACAGCACCAGCCTCGACGCGCAAACCCGCCTGCTGCAATTCATCCAGGACAAACAGGTGTTCCGCATCGGCGGCATCAAGCCGGTGAAAGTCGACGTGCGGCTGATTTTCGCCGCCAACGAAGCCCTCAAGGACTGCGTGCGCGAGGGACGCTTTCGCGAAGACCTGTATTACCGAATCGCCGTATTTCCCATCACCGTGCCGCCGCTGCGCGAGCGCCGCGACGACCTCGCCGCGCTGGCCGAATTTCTCATCGCCAAACACGCCGCCGAAATGGGGCGGCCACCCCTGCCGCTCGCGGCGGATGCGCGCGCCCGCATTCTGGCCTACGCCTGGCCAGGCAACGTGCGCGAACTGGAGAACACCCTGCAGCGCGCACTGGTGCTGGCGCGGGCCGAACACATCGGCATGGCCGACCTGCCGCAGGAATTGCGCGATCCGCCCGCCGCCCCCGCCTGCCCGTGGGGTGAGGCGGCCACCCTGGGCGAAGTCGAGTCCGCGTGGATCAAGCGGGTGCTGGCGCGCTGCGACGGCAACCGCACCCAAGCCGCCAAAATCCTCGGCATCGATCCTTCCACGCTCTGGCGGAAATTGAAGGACGCCGAAAGCTGA
PROTEIN sequence
Length: 448
MTPTLLIAEDDAALAKLAARVAEETGFDVVVRHDGNAARDLLETEAPDALLTDLRLPGCDGLDLLRVSKTLDPQRPVLLMTGYATPMNAIEAFRLGVSDILLKPFDLDVARAALVRLKAAFDQKARLRQLTEQVARSQGTAYLSAQSAAMQGTLELAAQVAGSLLPVLLEGETGVGKGVLARHIHALSPRAGGPFFTLHCGALPQTLLESELFGYEKGAFSGATARKPGLLELAAGGTLFLDEINSTSLDAQTRLLQFIQDKQVFRIGGIKPVKVDVRLIFAANEALKDCVREGRFREDLYYRIAVFPITVPPLRERRDDLAALAEFLIAKHAAEMGRPPLPLAADARARILAYAWPGNVRELENTLQRALVLARAEHIGMADLPQELRDPPAAPACPWGEAATLGEVESAWIKRVLARCDGNRTQAAKILGIDPSTLWRKLKDAES*