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RTP_03222018_0_1um_scaffold_407_23

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20550..21116)

Top 3 Functional Annotations

Value Algorithm Source
competence protein ComL n=1 Tax=Thiobacillus denitrificans RepID=UPI00036757FD similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 188.0
  • Bit_score: 346
  • Evalue 1.40e-92
competence lipoprotein similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 188.0
  • Bit_score: 330
  • Evalue 1.70e-88
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 188.0
  • Bit_score: 330
  • Evalue 8.30e-88

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGGCTTACGCCTACTACAAGGACAACGAACCGATTTCCGCCATTGCCGCGGCCGATCGCTTCATCAAGCTCCACCCCAACCATCCTAACGTCGATTACGCCTATTACCTGAAGGGTCTGGCGAATTTTAACGACGACCTGGGTTATCTCGGAAAAATCATCGACCAGGACCTCAGCGAGCGCGATCCCCGTGCCGCGCGGGACGCGTTTCTGGCTTTCAAGGAAGTGGCCACCCGTTTCCCCGAGGGGAAATATGCCGCCGACTCGACCGCTCGCATGAAATATCTGGTCAATGCGCTGGCCAGCAACGAAGTGCATGTCGCCAAGTATTACCTGAAGCGTGAGGCCTATGTGGCCTCTGCCAATCGTGCCAAGGAAGTGCTGAAAACCTACCCTGAAGCCCCAGCACTGGAAGAAGCGCTGGCGATCATGGTGCTGTCATACGACAAACTGAAACTCACCGACCTGCGCGACGATGCGCAACGCGTATTGAAGCTCAACTTCCCGAATAGCAAATACGCCAAGGGCGTCAGCACTGTAGGCAAGCCCTGGTATCAGTTCTGGTGA
PROTEIN sequence
Length: 189
VAYAYYKDNEPISAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGYLGKIIDQDLSERDPRAARDAFLAFKEVATRFPEGKYAADSTARMKYLVNALASNEVHVAKYYLKREAYVASANRAKEVLKTYPEAPALEEALAIMVLSYDKLKLTDLRDDAQRVLKLNFPNSKYAKGVSTVGKPWYQFW*