ggKbase home page

RTP_03222018_0_1um_scaffold_487_10

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(4981..5409)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 133.0
  • Bit_score: 240
  • Evalue 8.50e-61
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000370B97B similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 133.0
  • Bit_score: 179
  • Evalue 1.30e-42
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 133.0
  • Bit_score: 170
  • Evalue 2.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter sp. BA-93 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
TTGCGCTGCTGGACGTCAACGTACTTTATCGCCTTGCTGGATGCCGGCCACATACACCATGCCGCCGCCACGCGGTGGCTGAGCGAGCACCTTGATGCGGGATGGGCGTCGTGCCCGCTTACCCAGAACGGGTGCATCCGCATCCTGTCGCAAACCACTTACCCCAATCGTTCGCCCGCAGCCGAGGTGGCTGCTCGCCTGGCAGAAGCCACCCGCCATCCGGCGCACCATTTCTGGCCAGACGCCGTCAGCCTGCTGACACCAGGCTTGATGGAATGGAATAACCTGCTTACCGGCCGACACATCACTGACGCCTATTTGCTGGCGCTTGCGGTGAAAAATCGTGGAAGCTTTGTCACCCTGGACAAGGGCATTCCCCTGCCCGCCGTGCAAGGCGCGCAGGCCAAACACCTGGTGGTGCTGCCATGA
PROTEIN sequence
Length: 143
LRCWTSTYFIALLDAGHIHHAAATRWLSEHLDAGWASCPLTQNGCIRILSQTTYPNRSPAAEVAARLAEATRHPAHHFWPDAVSLLTPGLMEWNNLLTGRHITDAYLLALAVKNRGSFVTLDKGIPLPAVQGAQAKHLVVLP*