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RTP_03222018_0_1um_scaffold_487

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Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_487_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

399..713
DNA (315bp) protein (105aa)
Prevent-host-death family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU48_ACCPU
prevent-host-death family protein
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_03222018_0_1um_scaffold_487_2
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

713..1027
DNA (315bp) protein (105aa)
Plasmid stabilization system n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RU47_ACCPU
plasmid stabilization system
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_03222018_0_1um_scaffold_487_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1191..1430
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3D14
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_487_4
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1339..1767)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSK6_ACCPU
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
RTP_03222018_0_1um_scaffold_487_5
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1979..2224)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000379A477
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
RTP_03222018_0_1um_scaffold_487_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2237..2671)
DNA (435bp) protein (145aa)
Cephalosporin hydroxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA97_9PROT
cephalosporin hydroxylase
Cephalosporin hydroxylase {ECO:0000313|EMBL:BAN35480.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_1um_scaffold_487_7
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2770..4092)
DNA (1323bp) protein (441aa)
ATPase id=3221235 bin=GWA2_Deltaproteo_65_63 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
RTP_03222018_0_1um_scaffold_487_8
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4183..4557)
DNA (375bp) protein (125aa)
Ribonuclease VapC n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZH9_AROAE
VapC; nucleic acid-binding protein
Tax=CG_Rhodof_03
RTP_03222018_0_1um_scaffold_487_9
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4557..4865)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZI0_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09534.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
RTP_03222018_0_1um_scaffold_487_10
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4981..5409)
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000370B97B
PilT domain-containing protein
RTP_03222018_0_1um_scaffold_487_11
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5413..5649)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGC4_NITEC
Uncharacterized protein {ECO:0000313|EMBL:EXI72064.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
RTP_03222018_0_1um_scaffold_487_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5917..6579)
DNA (663bp) protein (221aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D189F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_487_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6595..7848)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000378ADE6
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7849..8085)
DNA (237bp) protein (79aa)
BolA family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3BF7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_487_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8100..8855)
DNA (756bp) protein (252aa)
ABC-2 type transport system permease protein id=1334753 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-2 type transport system permease
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8852..9760)
DNA (909bp) protein (303aa)
ABC-type multidrug transporter ATPase id=1334754 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC-type multidrug transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9757..10032)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366E6D6
NTP binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_487_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10032..10667)
DNA (636bp) protein (212aa)
signal peptide protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3864
signal peptide protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10732..12093)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A237E
outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12090..12557)
DNA (468bp) protein (156aa)
ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382018E
ABC transporter substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_487_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12558..13346)
DNA (789bp) protein (263aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97852.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_487_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13339..14151)
DNA (813bp) protein (271aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368E6A8
ABC transporter ATPase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14242..14697)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=1334760 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14742..16109)
DNA (1368bp) protein (456aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=12494681 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_487_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16228..17178
DNA (951bp) protein (317aa)
TPR repeat-containing protein id=12497926 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TPR repeat-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_487_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17184..17501
DNA (318bp) protein (106aa)
Uncharacterized protein id=1329860 bin=GWE1_T_denit_62_9 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ErfK/YbiS/YcfS/YnhG family protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17511..18002
DNA (492bp) protein (164aa)
peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
cyclophilin n=1 Tax=Thiobacillus thioparus RepID=UPI0003604044
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18008..18760
DNA (753bp) protein (251aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003778791
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18755..19408)
DNA (654bp) protein (218aa)
Putative uncharacterized protein id=1329863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_487_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19408..20577)
DNA (1170bp) protein (390aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase id=1329864 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 94 in total

View Taxonomy