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RTP_03222018_0_2um_scaffold_1260

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_1260_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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111..1214
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI000370F794
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_1260_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1298..3775
DNA (2478bp) protein (826aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI0003613858
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_1260_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4041..4757)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N7A4A1_9RHOO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
RTP_03222018_0_2um_scaffold_1260_4
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4754..7855)
DNA (3102bp) protein (1034aa)
Putative DNA methylase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZXP7_9RHOO
Putative DNA methylase {ECO:0000313|EMBL:ENO99118.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
putative DNA methylase
RTP_03222018_0_2um_scaffold_1260_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7955..8476)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G0I9_RALS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG68834.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
RTP_03222018_0_2um_scaffold_1260_6
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8952..9380
DNA (429bp) protein (143aa)
Helix-turn-helix domain-containing protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EFN7_9BURK
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKZ98155.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
helix-turn-helix domain-containing protein
RTP_03222018_0_2um_scaffold_1260_7
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9638..10339
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000363DC52
TnsA endonuclease {ECO:0000313|EMBL:EKZ98156.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
TnsA endonuclease
RTP_03222018_0_2um_scaffold_1260_8
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10320..12356
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003806DE8
Integrase catalytic subunit {ECO:0000313|EMBL:EKZ97877.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
integrase catalytic subunit
RTP_03222018_0_2um_scaffold_1260_9
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12359..13402
DNA (1044bp) protein (348aa)
TniB family protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EF63_9BURK
TniB family protein {ECO:0000313|EMBL:EKZ97876.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
TniB family protein
RTP_03222018_0_2um_scaffold_1260_10
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13389..14918
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y592_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO77617.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1260_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14915..16309
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WB66_RALSL
TniQ family protein {ECO:0000313|EMBL:AJX77783.1}; TaxID=1249472 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR2543.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1260_12
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16505..16999
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K1K4_CUPNH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ96120.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
RTP_03222018_0_2um_scaffold_1260_13
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..17381
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RGQ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKS72182.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1260_14
unknown

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17398..17670
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A920E
Displaying 14 items

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