name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_2um_scaffold_1347_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
418..909
|
Integron integrase id=1329025 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integron integrase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1347_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
906..1244
|
Integron integrase id=1329025 bin=GWE1_T_denit_62_9 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
integron integrase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1347_3
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1306..1524)
|
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BVB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV06306.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
uncharacterized conserved protein
|
|
RTP_03222018_0_2um_scaffold_1347_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1571..2236)
|
LuxR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000376AAD5
LuxR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1347_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2233..3435)
|
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E767F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1347_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3498..6749)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B28A9
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98415.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
transmembrane protein
|
|
RTP_03222018_0_2um_scaffold_1347_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6753..7688)
|
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic id=1354143 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7776..9053)
|
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Thiobacillus thioparus RepID=UPI0003688CF6
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1347_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9299..10876)
|
IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000360A556
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1347_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10884..11123)
|
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00036C3836
Fis family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1347_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11147..12211)
|
tRNA-dihydrouridine synthase B n=1 Tax=Thiobacillus thioparus RepID=UPI0003722868
dihydrouridine synthase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12331..12753
|
large conductance mechanosensitive channel protein MscL n=1 Tax=Thiobacillus denitrificans RepID=UPI000375DD36
large-conductance mechanosensitive channel
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12812..15553)
|
DNA polymerase I (EC:2.7.7.7)
DNA polymerase A id=1360714 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15581..16309
|
hypothetical protein; K06966 id=12496445 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1347_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16361..16684
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363DA3B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98404.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_1347_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16739..17017
|
Possible transmembrane protein id=1320916 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17092..17298
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF1CF
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1347_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17287..19527)
|
ATP-dependent DNA helicase UvrD (EC:3.6.1.-)
DNA-dependent helicase n=1 Tax=Thiobacillus thioparus RepID=UPI0003696F39
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19574..19825
|
Putative uncharacterized protein id=1320914 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1347_20
unknown
|
Not on your lists |
comp(19906..20112)
|
This feature has no annotations |
|
RTP_03222018_0_2um_scaffold_1347_21
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20209..20571
|
TPR repeat-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA38_9PROT
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:BAN35185.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_03222018_0_2um_scaffold_1347_22
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20635..21039
|
peptide chain release factor I n=1 Tax=Azoarcus toluclasticus RepID=UPI00036DB9B7
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
|
|
RTP_03222018_0_2um_scaffold_1347_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21099..21356
|
Putative uncharacterized protein id=1325890 bin=GWE1_T_denit_62_9 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_24
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21353..21550
|
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZA4_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09610.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
RTP_03222018_0_2um_scaffold_1347_25
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21771..21965
|
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FKH3_9BACT
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
|
|
RTP_03222018_0_2um_scaffold_1347_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22077..22805)
|
cbbP; phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19] id=12496452 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbP; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase {ECO:0000313|EMBL:AAZ98400.1}; EC=2.7.1.19 {ECO:0000313|EMBL:AAZ98400.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_1347_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23105..23596)
|
Putative uncharacterized protein id=1320911 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23754..26405
|
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI000368467C
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26402..26899
|
Putative lipoprotein B transmembrane id=1320909 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lipoprotein B transmembrane
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1347_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26896..27933
|
DNA polymerase III subunit delta (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036161C1
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|