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RTP_03222018_0_2um_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_264_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_264_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

651..1079
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375187C
type II secretion systen protein G
Type II secretion systen protein G {ECO:0000313|EMBL:AAZ97385.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1092..2276
DNA (1185bp) protein (395aa)
type II secretion system protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EB2C2
type II secretion system protein F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2273..3949
DNA (1677bp) protein (559aa)
general secretion protein E n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E78D4
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AAZ97387.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3930..4697
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374F0F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97388.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4700..5245
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003734055
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97389.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5242..5772
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9902
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97390.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5769..6290
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBBDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97391.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6292..8202
DNA (1911bp) protein (637aa)
Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIY3_THIDA
type II secretion system protein D
Type II secretion system protein D {ECO:0000313|EMBL:AAZ97392.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_264_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8231..8707
DNA (477bp) protein (159aa)
GSPG signal peptide protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E7635
type II secretion system transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8682..9092
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003754384
type II secretion system protein G
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9031..9603
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DD705
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9864..10466)
DNA (603bp) protein (201aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor id=1324497 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_264_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..10867
DNA (255bp) protein (85aa)
hypothetical protein id=1324498 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_264_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11151..11438)
DNA (288bp) protein (96aa)
Toxin, RelE family n=2 Tax=Geobacter sulfurreducens RepID=D7AK38_GEOSK
toxin, RelE family
RelE toxin {ECO:0000313|EMBL:AJY68670.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
RTP_03222018_0_2um_scaffold_264_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11428..11673)
DNA (246bp) protein (82aa)
Antitoxin, Phd family n=2 Tax=Geobacter sulfurreducens RepID=D7AK37_GEOSK
antitoxin, Phd family
Antitoxin {ECO:0000313|EMBL:AJY68669.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
RTP_03222018_0_2um_scaffold_264_17
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12016..12486
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FE01C
17 kDa surface antigen
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_264_18
unknown

Not on your lists

12607..12855
DNA (249bp) protein (83aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_264_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12730..13167)
DNA (438bp) protein (146aa)
addiction module protein n=1 Tax=Pseudomonas monteilii RepID=UPI0002E21292
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
RTP_03222018_0_2um_scaffold_264_20
unknown

Not on your lists

comp(13353..14255)
DNA (903bp) protein (301aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_264_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14355..14828)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4ECF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15114..16442)
DNA (1329bp) protein (443aa)
Putative helicase ATPase id=1327867 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
recombination factor protein RarA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_264_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16432..17040)
DNA (609bp) protein (203aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366EBE8
outer membrane lipoprotein carrier protein LolA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_264_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17278..19344)
DNA (2067bp) protein (689aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=1327863 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_264_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19403..19615)
DNA (213bp) protein (71aa)
hypothetical protein id=12493577 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_264_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19655..20944)
DNA (1290bp) protein (430aa)
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003740863
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_264_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..21408)
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=1358976 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_264_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21426..22079)
DNA (654bp) protein (218aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=12493580 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
adenylate kinase (EC:2.7.4.3)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_264_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22185..22943)
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase id=1358974 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_264_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22946..23134)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D33EC
tetraacyldisaccharide-1-P 4'-kinase
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 100 in total

View Taxonomy