name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_2um_scaffold_481_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
131..838
|
Putative uncharacterized protein id=1320592 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_2
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae
|
Not on your lists |
985..1266
|
hypothetical protein id=12497310 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27148.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
hypothetical protein
|
|
RTP_03222018_0_2um_scaffold_481_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1263..2801)
|
Ppx/GppA phosphatase (EC:3.6.1.11)
Xopolyphosphatase id=1320596 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2798..4036)
|
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362516E
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4043..4960)
|
CobD/CbiB family protein (EC:6.3.1.10)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368B46C
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_481_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4960..5535)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7778
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_481_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5716..6678
|
beta-lactamase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BABC1
beta lactamase
Beta lactamase {ECO:0000313|EMBL:AAZ96994.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_481_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6823..8427
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EC9CB
response regulator receiver modulated diguanylate cyclase
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8424..9173)
|
Uncharacterized conserved membrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK05_THIDA
hypothetical protein
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:AAZ96991.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_481_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9175..9486)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003604DB3
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_481_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9483..9857)
|
camphor resistance protein CrcB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E0F35
camphor resistance protein CrcB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_12
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10109..11638)
|
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037BC22E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE97996.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
|
|
RTP_03222018_0_2um_scaffold_481_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11748..12206)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D2A1D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_481_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12286..12636
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CB1B7
molybdenum-pterin-binding protein, molybdate transport system regulatory protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_481_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12650..14590)
|
protease n=1 Tax=Thiobacillus thioparus RepID=UPI00037BA42F
collagenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14644..15219)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK12_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15396..15953)
|
polyisoprenoid-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003653598
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16023..16526)
|
cytochrome B561 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BC105
cytochrome b561
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16523..16963)
|
MarR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00036045D0
MarR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_481_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17065..20598)
|
hypothetical protein AthiA1_10404 id=1324275 bin=GWE1_T_denit_62_9 species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20675..21550)
|
ABC transporter ATP-binding protein id=1324276 bin=GWE1_T_denit_62_9 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sulfonate ABC transporter ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21550..22500)
|
ABC-type nitrate/sulfonate/bicarbonate transport system id=1324277 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
binding-protein-dependent transport system inner membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22504..23964)
|
ABC transporter substrate-binding protein id=1324278 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ABC transporter substrate-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24128..24463)
|
Ferredoxin, 4Fe-4S id=1324279 bin=GWE1_T_denit_62_9 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24474..25424)
|
Phycobiliprotein, putative id=1324280 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
armadillo/beta-catenin-like repeat family protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25435..25668)
|
Ferredoxin id=1324281 bin=GWE1_T_denit_62_9 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4Fe-4S ferredoxin
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25679..27409)
|
frdA; putative reductase (alkanesulfonate metabolism) (EC:1.3.99.1)
Putative reductase (Alkanesulfonate metabolism) id=1324282 bin=GWE1_T_denit_62_9 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_481_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27419..28180)
|
GntR family transcriptional regulator n=2 Tax=Pseudomonas putida RepID=R9V8W7_PSEPU
GntR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
RTP_03222018_0_2um_scaffold_481_29
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28443..29534)
|
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020, ECO:0000313|EMBL:AJP47577.1}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Acetate kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKJ6_THIDA
acetate kinase
|
|
RTP_03222018_0_2um_scaffold_481_30
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29522..31882)
|
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Probable phosphoketolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKJ7_THIDA
phosphoketolase
|