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RTP_03222018_0_2um_scaffold_780_21

Organism: RTP_03222018_0_2um_Hydrogenophilales_59_243

near complete RP 46 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: comp(16366..16911)

Top 3 Functional Annotations

Value Algorithm Source
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 181.0
  • Bit_score: 302
  • Evalue 6.10e-80
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CAD84589.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CAD84589.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 181.0
  • Bit_score: 302
  • Evalue 3.00e-79
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas tolaasii RepID=UPI00036734E0 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 181.0
  • Bit_score: 311
  • Evalue 4.70e-82

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAAAACCACGCCACTTGCAATTCCAGAAGTCGTCCTGATCGAACCCAAAGTGTTCGGCGACGACCGCGGCTTCTTCTTCGAAAGTTTCAACCAGGAGAAATTTGAAGCCGCCATCGGCAGCCAGGTCGCCTTCGTGCAGGACAACCACTCGCGTTCGGTCAAAAACGTGCTGCGCGGCCTGCATTACCAAATTCGCCAGCCGCAGGGCAAACTGGTGCGCGTGGTGCAGGGCGAAGTGTTCGATGTCGCCGTCGACATCCGCAAATCTTCACCCACCTTCGGGCAATGGGTCGGTGAAATGCTGTCGGCTGAAAACAAACGGCAGATGTGGGTGCCGGAAGGCTTTGCGCACGGCTTCGTCGTGCTGTCGGAAACAGCGGAGTTTCTCTACAAAACCACCGATTACTATGCGCCGGAACACGAGCGCTGCATTTCCTGGGACGACGACGCCATCGGCATTCAGTGGCCCCTGGACGGCAAGCTCGCGCTATCCGCCAAAGACCAGCAAGGTAAATCGCTCGCCGAGGCGGAGCACTTCGCATGA
PROTEIN sequence
Length: 182
MKTTPLAIPEVVLIEPKVFGDDRGFFFESFNQEKFEAAIGSQVAFVQDNHSRSVKNVLRGLHYQIRQPQGKLVRVVQGEVFDVAVDIRKSSPTFGQWVGEMLSAENKRQMWVPEGFAHGFVVLSETAEFLYKTTDYYAPEHERCISWDDDAIGIQWPLDGKLALSAKDQQGKSLAEAEHFA*