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RTP_03222018_0_2um_scaffold_1785_7

Organism: RTP_03222018_0_2um_Hydrogenophilales_59_243

near complete RP 46 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: 6319..7035

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12497621 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 238.0
  • Bit_score: 427
  • Evalue 7.70e-117
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 238.0
  • Bit_score: 421
  • Evalue 1.20e-115
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 238.0
  • Bit_score: 421
  • Evalue 5.90e-115

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCAGGCAAACAAACGTCACTTGACGTGCAAGTCAATAAATATGCGCCGCTGGTCAAGCGCATTGCGTATCACATGATGGCGCGCCTACCCGCCAGCGTAGAAGTGGATGATCTCATTCAGGTCGGACTGATTGGCTTGATGGATGCGATATCCCGCTTCGACGGCACCCAGGGCGCTCAATTCGAATCCTATGCGACCCAGCGTATCCGCGGTTCCATGCTGGACGATCTGCGTGAAGCGGATTGGTTGCCGCGCCACGTACGGCAGAAATCACGCCAGATCGAAGCGGCTATACACCGGCTGGAACAGCGCAATGGCAAGCCGCCGTCCGAGCAGGAAATCTCTGCTGAAATGGGGCTGGCCATCAGTCAGTATCAATCCATGCTGGGTGATGTGAAGTGCTCGCAACTGTTTTACTACGAAGATTTTTCGGACGAAGACAGCGCCAGTTTTCTGGAGCGCTATCTGGTCGATGGAAGCGACGATCCGCTTGCAGTGCTGGAGGACGGTGGCTTTCGCGATAGTCTGGTCGCAGCCATCCACCATCTGCCCGAGCGCGAGCGCGAGCGCAGCATGATGGGCATGTACTACGAACAGGACATGAACCTGAAGGAAATTGGCGTGGTGCTGGGTGTGTCCGAATCGCGCGTTTGCCAGTTGCATTCACAGGCGGTTGCGCGTCTGCGTGCCCAACTCAAAATCTGGAAAGACTGA
PROTEIN sequence
Length: 239
MAGKQTSLDVQVNKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAISRFDGTQGAQFESYATQRIRGSMLDDLREADWLPRHVRQKSRQIEAAIHRLEQRNGKPPSEQEISAEMGLAISQYQSMLGDVKCSQLFYYEDFSDEDSASFLERYLVDGSDDPLAVLEDGGFRDSLVAAIHHLPERERERSMMGMYYEQDMNLKEIGVVLGVSESRVCQLHSQAVARLRAQLKIWKD*