name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_2um_scaffold_1785_1
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..814)
|
SEFIR domain protein n=1 Tax=Pectobacterium sp. (strain SCC3193) RepID=K4FSF9_PECSS
SEFIR domain-containing protein {ECO:0000313|EMBL:KJY92307.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
SEFIR domain protein
|
|
RTP_03222018_0_2um_scaffold_1785_2
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(897..1508)
|
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J013_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW20535.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
|
|
RTP_03222018_0_2um_scaffold_1785_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1633..2457
|
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB id=12495356 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flagellar biosynthetic protein FlhB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1785_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2454..4529
|
flagellar biosynthesis protein FlhA n=1 Tax=Thiobacillus denitrificans RepID=UPI0003726BF3
flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1785_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4526..5662
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F6A90
flagellar biosynthetic protein FlhF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5652..6302
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360C5ED
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1785_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6319..7035
|
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12497621 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA polymerase sigma-70 factor
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
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RTP_03222018_0_2um_scaffold_1785_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7111..8334
|
malate dehydrogenase (EC:1.1.1.40)
malate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000366945B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8360..8740
|
succinate dehydrogenase subunit C (EC:1.3.5.1)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369C200
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1785_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8737..9096
|
succinate dehydrogenase subunit D (EC:1.3.5.1)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379B20E
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1785_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9093..10847
|
succinate dehydrogenase subunit A (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
succinate dehydrogenase flavoprotein subunit n=1 Tax=Thiobacillus thioparus RepID=UPI0003760C49
|
|
RTP_03222018_0_2um_scaffold_1785_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10899..11198
|
Excinuclease ABC, C subunit-like protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7PVA1_9GAMM
Excinuclease ABC C subunit domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
|
|
RTP_03222018_0_2um_scaffold_1785_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11355..12050
|
succinate dehydrogenase subunit B (EC:1.3.5.1)
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000366FC98
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12294..13586
|
citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
type II citrate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C9A23
|
|
RTP_03222018_0_2um_scaffold_1785_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13616..15460
|
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Thiobacillus thioparus RepID=UPI000382C67B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15409..16176
|
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Thiobacillus thioparus RepID=UPI000382C67B
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:AAZ97141.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_2um_scaffold_1785_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16166..17302
|
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
Dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEX1_THIDA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17349..18170
|
ATP-binding ABC transporter protein id=1335690 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ATP-binding ABC transporter protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1785_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18302..19966
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644CFC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1785_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19963..20616
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A87F
signal transduction histidine kinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_2um_scaffold_1785_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20642..20986)
|
Putative uncharacterized protein id=1335686 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_2um_scaffold_1785_22
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20974..21237)
|
hypothetical protein n=1 Tax=Serinicoccus marinus RepID=UPI0003B4DAB9
Uncharacterized protein {ECO:0000313|EMBL:EXI77387.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
|
|
RTP_03222018_0_2um_scaffold_1785_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21337..21732)
|
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXU5_LEPCP
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_2um_scaffold_1785_24
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(21752..22099)
|
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MHS1_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KHE91027.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
|
|
RTP_03222018_0_2um_scaffold_1785_25
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22213..22431)
|
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y8X0_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27014.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
RNA-binding S4 domain-containing protein
|
|
RTP_03222018_0_2um_scaffold_1785_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22481..22993
|
Tax=CG_Hydro_01
|
|
RTP_03222018_0_2um_scaffold_1785_27
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22891..23133)
|
Putative antitoxin of toxin-antitoxin stability system n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZB8_AROAE
Antitoxin YefM {ECO:0000313|EMBL:CDQ09853.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
antitoxin of toxin-antitoxin stability system
|
|
RTP_03222018_0_2um_scaffold_1785_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
|
Not on your lists |
comp(23222..23500)
|
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLU8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70005.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
|
|
RTP_03222018_0_2um_scaffold_1785_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
|
Not on your lists |
comp(23484..23762)
|
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLU9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70006.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
|
|
RTP_03222018_0_2um_scaffold_1785_30
unknown
|
Not on your lists |
23925..24020
|
This feature has no annotations |