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RTP_082018_0_1um_scaffold_7229

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_7229_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3..197)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BCB4C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(254..892)
DNA (639bp) protein (213aa)
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF76_NIAKG
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(920..1510)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003736940
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1592..2755)
DNA (1164bp) protein (388aa)
Fe-S-cluster-containing hydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI0003690608
quinol:cytochrome c oxidoreductase quinone-binding subunit 1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2921..6031)
DNA (3111bp) protein (1037aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003799C13
quinol:cytochrome c oxidoreductase iron-sulfur protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6116..7372)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037730E7
cytochrome C class I
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7710..8282
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F34CB
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8274..8747)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB8D2
acetyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8750..9484)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362CBD4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9537..9839
DNA (303bp) protein (101aa)
Amidohydrolase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWY1_HALH1
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9793..10770
DNA (978bp) protein (326aa)
Amidohydrolase family enzyme n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHS2_9FLAO
amidohydrolase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_trna_1
unknown

Not on your lists

10825..10896
DNA (72bp)
transferRNA Arg
RTP_082018_0_1um_scaffold_7229_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11085..11537)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HYT7_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11539..11742)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J672_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11793..12962)
DNA (1170bp) protein (390aa)
Helix-turn-helix-domain containing protein AraC type id=4213889 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
PAS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_7229_15
unknown

Not on your lists

comp(12931..13290)
DNA (360bp) protein (120aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_7229_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13308..15239)
DNA (1932bp) protein (644aa)
Probable glycogen debranching enzyme n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z1T1_FLABF
putative glycogen debranching protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 17 items

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