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RTP_082018_0_1um_scaffold_2006

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_2006_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(77..394)
DNA (318bp) protein (106aa)
thioredoxin n=1 Tax=Segetibacter koreensis RepID=UPI0003724257
thioredoxin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(527..4201)
DNA (3675bp) protein (1225aa)
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI0_NIAKG
DNA polymerase III subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4296..4991
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F442F
membrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4992..6482)
DNA (1491bp) protein (497aa)
Polysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJS5_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6488..8188)
DNA (1701bp) protein (567aa)
Peptidase M1 family protein id=4974974 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
peptidase M1 membrane alanine aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8222..8878)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DA35D
Peptide methionine sulfoxide reductase msrA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9173..9478
DNA (306bp) protein (102aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9517..11634
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003755DAA
DNA mismatch repair protein MutS domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11670..13598
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCZ6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13602..14054
DNA (453bp) protein (151aa)
Putative beta-D-galactosidase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VD54_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14101..14823
DNA (723bp) protein (241aa)
Arylsulfatase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D3D0_9BACT
arylsulfatase A family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14804..15544
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000361CBF2
arylsulfatase A family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15644..15775)
DNA (132bp) protein (44aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B729B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15776..16102)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037285E6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16099..17388)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D4CD8F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17390..17938)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036AA6E0
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17947..18357)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XD03_CELAD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18362..19333)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CDBA6
iron-sulfur cluster repair di-iron protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_trna_2
unknown

Not on your lists

comp(19811..19895)
DNA (85bp)
transferRNA Ser
RTP_082018_0_1um_scaffold_2006_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19978..21705
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CDD8
xenobiotic-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22011..22232
DNA (222bp) protein (74aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22300..24735)
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038006A9
pyrophosphate-energized proton pump
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24832..26037)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036945FD
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26160..27314
DNA (1155bp) protein (385aa)
Phosphoglycerate dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLU7_9SPHI
3-phosphoglycerate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27346..28932)
DNA (1587bp) protein (529aa)
Asparaginase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJH3_9SPHI
glycosylasparaginase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_25
unknown

Not on your lists

29160..29465
DNA (306bp) protein (102aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_2006_26
unknown

Not on your lists

comp(29317..29664)
DNA (348bp) protein (116aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_2006_27
unknown

Not on your lists

comp(29764..30267)
DNA (504bp) protein (168aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_2006_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30616..31770)
DNA (1155bp) protein (385aa)
gdhB; glucose sorbosone dehydrogenase (EC:1.1.5.2)
Glucose sorbosone dehydrogenase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6G1_9BACT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2006_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31774..33141)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A4C3E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 118 in total

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