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RTP_082018_0_1um_scaffold_2830

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_2830_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..893
DNA (891bp) protein (297aa)
Nucleoside permease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQV8_SOLCM
nucleoside permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

923..1168
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F0BBD
radical SAM protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1197..2036
DNA (840bp) protein (280aa)
Putative menaquinone biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH7_NIAKG
putative menaquinone biosynthesis protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2055..2417)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037F4D3D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2432..4435)
DNA (2004bp) protein (668aa)
2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L375_HALH1
2,4-dienoyl-CoA reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4480..5910)
DNA (1431bp) protein (477aa)
Serine dehydratase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWA2_9SPHI
L-serine dehydratase 1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5950..7170
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003759AB8
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7212..8309
DNA (1098bp) protein (366aa)
Aspartate transaminase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPM4_9SPHI
aspartate aminotransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8393..8968)
DNA (576bp) protein (192aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BTN7_9FLAO
putative carboxypeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8913..9989)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037822D5
metallocarboxypeptidase, peptidase M14_like superfamily
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10000..11574)
DNA (1575bp) protein (525aa)
Zinc carboxypeptidase n=1 Tax=Cecembia lonarensis LW9 RepID=K1L774_9BACT
Zinc carboxypeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11636..12619
DNA (984bp) protein (328aa)
Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR68_CHIPD
type 11 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12609..13190)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D0CAC
dephospho-CoA kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13273..13611)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360EADD
preprotein translocase subunit YajC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13649..14569)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361EE17
NusB antitermination factor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14824..15042
DNA (219bp) protein (73aa)
molecular chaperone GroES n=1 Tax=Niabella aurantiaca RepID=UPI00036FBBBF
10 kDa chaperonin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15053..16687
DNA (1635bp) protein (545aa)
molecular chaperone GroEL n=1 Tax=Segetibacter koreensis RepID=UPI000366B2C7
60 kDa chaperonin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16753..17451)
DNA (699bp) protein (233aa)
YhhN family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQB3_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17522..17869
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E30BF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17884..18342
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B5303
peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18495..21218
DNA (2724bp) protein (908aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C7C56
protein translocase subunit secD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21243..21593)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371313B
iron-sulfur binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21706..22206
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE8_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22222..23784
DNA (1563bp) protein (521aa)
methylmalonyl-CoA mutase n=1 Tax=Segetibacter koreensis RepID=UPI00037E6150
methylmalonyl-CoA mutase large subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23786..24205)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379907F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24325..25620
DNA (1296bp) protein (432aa)
Amidohydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRT9_CHIPD
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25624..27534
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003651140
peptidase S9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27567..28256)
DNA (690bp) protein (230aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0G7_9FLAO
alanine racemase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28269..29432)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUS9_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2830_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29438..30592)
DNA (1155bp) protein (385aa)
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE1_NIAKG
butyryl-CoA dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 40 in total

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